Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4076 ATGCCGGTGAACATGGTAGGAGATGTAATCAACATAGATATGGAAGTTGCAAAGATGTACACTTTCAGGAAGAAGATCCACAAAGATAAGGATGTTGAGCCAACTGAATTCGAAGAGTCTATTGGACAGGCTTTGTTTGATCTTGAAAATACCAATACGGAGCTGAAAAGCGAACTGAAAGATTTATACATAAATTCAGCTGTTCAAGTTGATGTGTCTGGGGGTCGAAAGGCTGTTGTTATCCACGTTCCCTTCAGATTAAGGAAAGGTTTCCGGAAGATTCATGTTAGACTTGTTAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGGATGTAGTGTTGATTGCCACCCGTAGGATAGTGAGGCCGCCAAAGAAAGGATCTGCAGTTCAGCGCCCTCGCAACCGTACACTCACTGCTGTGCATGAGGCAATGCTTGAGGATATTGTATTGCCGGCTGAGATCGTTGGGAAGCGTGTTAGGTATCGTGTTGATGGGTCGACAATCATGAAGGTTTTCTTGGATCCCAAGGAACGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAACTTTCAGGCAAAGATGTGGTGTTTGATTACCCTGCACAAGAGGCTTAG 630 0.4413 MPVNMVGDVINIDMEVAKMYTFRKKIHKDKDVEPTEFEESIGQALFDLENTNTELKSELKDLYINSAVQVDVSGGRKAVVIHVPFRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRNRTLTAVHEAMLEDIVLPAEIVGKRVRYRVDGSTIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFDYPAQEA* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4076 209 PANTHER 40S RIBOSOMAL PROTEIN S7 12 208 IPR000554 GO:0003735|GO:0005840|GO:0006412
Amo05g4076 209 Coils Coil 45 65 - -
Amo05g4076 209 PANTHER 40S RIBOSOMAL PROTEIN S7 12 208 - -
Amo05g4076 209 Pfam Ribosomal protein S7e 25 204 IPR000554 GO:0003735|GO:0005840|GO:0006412
Amo05g4076 209 ProSitePatterns Ribosomal protein S7e signature. 97 110 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4076 Amo-Chr5 108964426 108967126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4076 19 209 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.058 6.20e-112 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4076 K02993 - gmx:100527642 351.288