Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4068 ATGGCTGTTGTAAGAGAACAAGATATGAAATGGAGAAGAGAGAGAAACAAGTTGAGGCAGCAGCAAGTCCCTTCCATGACCCAAACCACAAGCTGCAAATCCACCATATCCTCTCTCATCCTCTCCTCTTTCTCCAATGAAACCGCCACAAACAAGAACAAGAGTACATTCAGGGGACTTGGTTGCACTGCTGCTTCTGCATCATCACAACAAGTCTCAGTTCCTGCTGTGATTCGATCCTCTGCTGATTGGAAGAACACTAGGAAGAAGAACAAGTGCAGAAGGAGGAACACTGAAAAAAGCAGCATAACATGTCACCATAAGCATGCTTCTTCTTCTTCTTCTTCTTTTCAGGATGTATGGTGTGGCCCTGGAATTGGATTCGCATCAGATCATGCTTCTGCTTCTGTGGATTGTGTGGTGGCAAGGAAGAATGCTTCTTCAAGAAGGAACCTTGATGCTGTTGAGAGAGCAACACATAGGGAAGAGCGTCCTCCGCCTTATTTCGGAAGACGCACCATGAACACAGGCTTCTCTTTCATGGATGATGATCAAGGCATTTTCGTGGCACGCCCCGGATCGGAGTCTTTTTCTGCCGGTAGATACTATCGCCACGTTCCGCATCCCTCCTCCTCTGATGGTCTTGCTGAGATAATGATACTTCAAGGAAGACTATTAATGGGTGGAAGATTAAATTCACATGACCAATTTAGAGACTGGAGACTTGATGTTGATAACATGTCATATGAGCAATTGCTTGAGCTGGGTGAGAGAATTGGCCATGTTAACACTGGACTTAAAGAAGATGAGATGGGACACAACATAAGGAAGATTAAGCATGTAATTTCAAATAATTATTCAAAGCATCAAATAGACAAAAAGTGCAGCATTTGTCAGAAAGAAATAAACGGAAACATGTGGCAAAAATGGGACGGAAACGGGGACAGAAAACATTTTACTAAACAGAAATGGGGTGGGGGCGGGGGCATAGATGCCCCATGGAGACCCATTGCCTTTTCTAGGCACAGAAAGACCCATGCATTAAGAGGTGGAACACTAATTTTGGGATATAGACAATATTTTCAGCAACCGTTTTCCAAATATGTCCTCATCCTAAATTCATGA 1125 0.4364 MAVVREQDMKWRRERNKLRQQQVPSMTQTTSCKSTISSLILSSFSNETATNKNKSTFRGLGCTAASASSQQVSVPAVIRSSADWKNTRKKNKCRRRNTEKSSITCHHKHASSSSSSFQDVWCGPGIGFASDHASASVDCVVARKNASSRRNLDAVERATHREERPPPYFGRRTMNTGFSFMDDDQGIFVARPGSESFSAGRYYRHVPHPSSSDGLAEIMILQGRLLMGGRLNSHDQFRDWRLDVDNMSYEQLLELGERIGHVNTGLKEDEMGHNIRKIKHVISNNYSKHQIDKKCSICQKEINGNMWQKWDGNGDRKHFTKQKWGGGGGIDAPWRPIAFSRHRKTHALRGGTLILGYRQYFQQPFSKYVLILNS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4068 374 MobiDBLite consensus disorder prediction 85 106 - -
Amo05g4068 374 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 5 303 IPR045191 GO:0061630
Amo05g4068 374 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 5 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4068 Amo-Chr5 108735773 108739479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4068 7 250 C3H Transcription Factor Family AT1G73760 38.007 1.23e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4068 - - ahf:112751066 677.167