Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4066 ATGGATCCACCACCAACACAGCCACCAGCAATGCCACCACATCCATCCACCATGGCTCCCACCACTGTCATGGCTGCCACTGCCACATCAATTCAAACAAACAACCCYGACTCGGTTGAATCCTCGCCGCGCTGTCGTATCGGTGAAACATGGAAYGATGAGCTTATTGTGCCGGTCCCAGGCGCCAAGCTCCGCCTCATGTGCAGCTACGGTGGCCACATCATGCCACGCCCCCATGATAAGTCCCTCAGTTACATAGGTGGTGACACTAGAATYGTGGTGGTGGATCGCAATTCAACCCTAAAGGACCTCTGTTTGCGCCTTTCCCGCACTTTACTCAATGGAAGACCCTTCACACTCAAGTACCARTTACCAAACGAGGACCTTGACAACCTCATCTCTGTCACCACTGATGAAGACCTTGACAACATGATCGAAGAGTATGATCGTGTGGCTGCAGCATCAGCATCTACCCTGAAGCCTTCACCTTCAAGACTCAGGGTGTTCCTGTTCTTCTCCAAGCCAGAGACCACTGTTTCAATGGGATCMCTCCTTGATGATGCGAAATCTGAGACATGGTTCGTGGATGCRCTYAACAACTCGGGGATGCTCACAAGGGGSGTGTCAGATTCCGCAGCAGGAGAAACCATTGTAAACCTTGATGGTGTTGGCCCTGCTGTTTCAGCTAGTGGTTCAAGCAACAACTTGGAGGCTCAGGCTGCGGCAGTGGCAGAGTCTTTGGTTCTGGCTGATAATATCACTGGCAACAATAACAACAACAACAACAACAAGGTGAAGAATTTGCAGGATGTTGCAGCTGTGAATTCACTRCCTGGCTCACCTTCATCAGCTTCTTCTCCTTCAATGGCTAATCTCCCACCCATCCGGGTTCGTGTCGATGACAATGGTGCTAGTAGGCTTCAGCAGGAGCAAAGGGTTGGGGTGATGGAGGAGCAGTTAGCACAGATGACAATTGGCGCAAGTGGTGTGAGGCGAGATGAAGGGTTTGTTGTTGTTCCCTCTACTGTGGCTATGCCTGCTGCAGTGCCTGCAACTATGAGTTTGGCTGCAGCAGCAATGGTTACTAGCAATAGTAGTGATATCATGAATAGGCTTATTATCTCTGAGGATGAGAGATCAGATCCTGGTGTTCCTCTTGGGTTTGGGAAGCCTCCTTTACCATTGCAACTTGTGCAACCAAGGACTGGTGGTGGTGTGAGTTTACCTTCTCCAGATTCAGTTGCAAGTGACAGTAGTAGCATTGCATCAACAAATTCTTTCTCGAAGAATGTGTACTATCAAGAACAAGTCCAACCTTCACATGTAGATAACAAAGCTCCTACCATAAGCAATGCCAAGATTGAAATTAGAGAACAAATTCAGGATCCAAATTACACATTACCTCCACAATTGGATCAAAACCAGCAACTCCACCAGCAATTTGTGCAAGCAAGCAGCCCCTACATTCACCACCCTGCGGCCGCCACCAATACAGTGCCAGTGTCATCCTACTACCCAGTTTACGCACCGCCGCCACCGCTGCCATCACAGCCAACACTTCACCAGCATCCAATTCCCCAAACTCAACAACAGCAACAGTATCAACCAGTTTATGTTATGCCTGTTGGACACACACAACAACCATACAATGTAACATTGCAACACAACATTGCTGATCCTAACATGGTAGCATCAGGTAGACCACTAGTACCCCAGAGTATTGCTGCTCCTGCAGTGTCAACAACAGCATACAAAGATGGCACATTACCAATTTACCCTCCTAGGCCAAATACCCAACCACAAACTACTCAGGCATTTATTCAAATACCTTCTAGTCACTTTCAGCAACAACCACAGTATGTGGGTTTGACCCAAGTTCAGCACCATCAACMACCACCACCACCACAGCACATTGCTGTGGYTCCATCTGGTAGTGGTGGAGGTGGTGGTGCTAATTACGGCTATGAATATGGTGGTGGCACTGTGCAAGATCAAGCTGCATACTACACACAACAGCAACAAGCTACTACAGCTCCATTGACTTCTCAGTACCAATCCATGACTCCGGCGGCGGCAGCTGCGGCGCTATCGGATGTTTCGAAGCAATTCCCCAATGAAAGTCTTCAGCAGCCAAACAGAGCTTCACAACCCGTATAG 2157 0.4854 MDPPPTQPPAMPPHPSTMAPTTVMAATATSIQTNNPDSVESSPRCRIGETWNDELIVPVPGAKLRLMCSYGGHIMPRPHDKSLSYIGGDTRIVVVDRNSTLKDLCLRLSRTLLNGRPFTLKYQLPNEDLDNLISVTTDEDLDNMIEEYDRVAAASASTLKPSPSRLRVFLFFSKPETTVSMGSLLDDAKSETWFVDALNNSGMLTRGVSDSAAGETIVNLDGVGPAVSASGSSNNLEAQAAAVAESLVLADNITGNNNNNNNNKVKNLQDVAAVNSLPGSPSSASSPSMANLPPIRVRVDDNGASRLQQEQRVGVMEEQLAQMTIGASGVRRDEGFVVVPSTVAMPAAVPATMSLAAAAMVTSNSSDIMNRLIISEDERSDPGVPLGFGKPPLPLQLVQPRTGGGVSLPSPDSVASDSSSIASTNSFSKNVYYQEQVQPSHVDNKAPTISNAKIEIREQIQDPNYTLPPQLDQNQQLHQQFVQASSPYIHHPAAATNTVPVSSYYPVYAPPPPLPSQPTLHQHPIPQTQQQQQYQPVYVMPVGHTQQPYNVTLQHNIADPNMVASGRPLVPQSIAAPAVSTTAYKDGTLPIYPPRPNTQPQTTQAFIQIPSSHFQQQPQYVGLTQVQHHQXPPPPQHIAVXPSGSGGGGGANYGYEYGGGTVQDQAAYYTQQQQATTAPLTSQYQSMTPAAAAAALSDVSKQFPNESLQQPNRASQPV* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4066 718 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 711 - -
Amo05g4066 718 MobiDBLite consensus disorder prediction 1 16 - -
Amo05g4066 718 MobiDBLite consensus disorder prediction 677 718 - -
Amo05g4066 718 SUPERFAMILY CAD & PB1 domains 79 182 - -
Amo05g4066 718 MobiDBLite consensus disorder prediction 627 652 - -
Amo05g4066 718 MobiDBLite consensus disorder prediction 274 295 - -
Amo05g4066 718 MobiDBLite consensus disorder prediction 274 290 - -
Amo05g4066 718 MobiDBLite consensus disorder prediction 400 421 - -
Amo05g4066 718 CDD PB1_UP2 67 171 - -
Amo05g4066 718 Gene3D - 84 171 - -
Amo05g4066 718 MobiDBLite consensus disorder prediction 700 718 - -
Amo05g4066 718 SMART PB1_new 78 171 IPR000270 GO:0005515
Amo05g4066 718 MobiDBLite consensus disorder prediction 1 22 - -
Amo05g4066 718 PANTHER OS05G0427100 PROTEIN-RELATED 1 711 - -
Amo05g4066 718 Pfam PB1 domain 79 171 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4066 Amo-Chr5 108693026 108695917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4066 63 200 MAP Kinase Kinase Kinase AT5G57610 44.286 5.08e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4066 - - ahf:112751063 1156.74