Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4061 GCAGTCGGCGCTACCCAACCGGTCTTCCCGCACGATTGGAGTGTTTTCTTCAAGCTTGGTGTTCGCTGCTGCCATCGTCCCGCGCGCCTCCCTCGTGCTACCGTCGAGCGTCAGTCGTCGACTAGGAGCTCCCCGTCACCGTCGCCTGGCCGCCGGACATCCGCACACCCGTGTGGACCTGTGTCTTTATGGTGGTGTAATGGGATTGAGTTCTTGTTGTTTATATATGGTGGGGCTCCATACCAGACTCAGGAGAGTAAGCTTAGGAGAGGCGTTGATATTGTTGTTGGCACTCCAGGTCGCGTGAAGAGGAGAAATATTGACCTAAGCCAGCTAAAGTTCCATGTCCTTAATGAGGCTAATGAGATGCTCAGAATGGGTTTTTGCTACTTTGCTAGCTATTTCTTAGGTAAAAAACCTAGCAATGATTCAAAAAAAGTGCAGCCAAAGAATTTAATACCAAACCAGCAGAATGGAGAGCCACCTCAAGAGAAGATATTTGACATAACAATGGATCCAAGATGA 525 0.4933 AVGATQPVFPHDWSVFFKLGVRCCHRPARLPRATVERQSSTRSSPSPSPGRRTSAHPCGPVSLWWCNGIEFLLFIYGGAPYQTQESKLRRGVDIVVGTPGRVKRRNIDLSQLKFHVLNEANEMLRMGFCYFASYFLGKKPSNDSKKVQPKNLIPNQQNGEPPQEKIFDITMDPR* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4061 174 MobiDBLite consensus disorder prediction 146 163 - -
Amo05g4061 174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 140 IPR027417 -
Amo05g4061 174 MobiDBLite consensus disorder prediction 142 174 - -
Amo05g4061 174 MobiDBLite consensus disorder prediction 34 51 - -
Amo05g4061 174 Pfam DEAD/DEAH box helicase 73 140 IPR011545 GO:0003676|GO:0005524
Amo05g4061 174 Gene3D - 58 168 IPR027417 -
Amo05g4061 174 MobiDBLite consensus disorder prediction 32 56 - -
Amo05g4061 174 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 73 139 - -
Amo05g4061 174 PANTHER DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21 73 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4061 Amo-Chr5 108598986 108600157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4061 77 128 Eukaryotic Initiation Factors Gene Family AT3G13920 44.643 3.09e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4061 K16911 - csin:114281725 92.0485