Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4039 ATGGATTCTCACCGTGACATAGAGGGCACCCAAGCTGATCATTCTGAAAGCAACAACAACATTTCCATTCAACAGGTGACTCACATGAATCAAAATACTGCTACAAAGGAGCTAAGCAAGGAAAGTGCTATGGCCATGATAACAGTTACTTCAGAACAACAAAGTCCAGTTTCTGTTCTTGATCTGCAATTTTACAGTGAAGACCCACCTTTTCCAATCAAAAAGAAGACAGAAATCTCAAAAGATTTAGATGAAGCTTTAGCCACTCCTGATAACATAGGGCATGCATTGGACCTTCCTCTTTCATTCAATAACACAAAGGCCAACTTCAGCAATGGAACCAGTGATGATGACCTTCAAACTCAGAATTTGGATAAAGTTCTTTGGCAAAATGACGATAATAGCGAGAAATTCACCAATTGCAGAGAGAGAAAAGATTCTGACCGTAAATACATAGCAGAAATATTGCTCGCATCAGGGCTGCTCAGTAGCCCCAGCTTAATCCAGGCAGTTCATTCACCAGGTCACCTGATAAACCCAAAGTTGTTCTTTGCACTTGAACTATTGAAGACAAACAAGCTGCAGTTCAATATGAAGCACAATGCTGGGAAGATTCTTAGGATAAATAATCTTGAAGAAATGCAAAGAAAACTCATATTTGATGTTGTCAATGAGATTCTAGTACAAAAAATTAGTGCCTTAATATATGTATATTTTGGCTAA 723 0.3831 MDSHRDIEGTQADHSESNNNISIQQVTHMNQNTATKELSKESAMAMITVTSEQQSPVSVLDLQFYSEDPPFPIKKKTEISKDLDEALATPDNIGHALDLPLSFNNTKANFSNGTSDDDLQTQNLDKVLWQNDDNSEKFTNCRERKDSDRKYIAEILLASGLLSSPSLIQAVHSPGHLINPKLFFALELLKTNKLQFNMKHNAGKILRINNLEEMQRKLIFDVVNEILVQKISALIYVYFG* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4039 240 PANTHER LONGIFOLIA PROTEIN 6 232 IPR033334 GO:0051513
Amo05g4039 240 MobiDBLite consensus disorder prediction 1 20 - -
Amo05g4039 240 PANTHER LONGIFOLIA PROTEIN 6 232 - -
Amo05g4039 240 Pfam Domain of unknown function (DUF4378) 149 232 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4039 Amo-Chr5 108169685 108170586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4039 8 234 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 32.083 4.89e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4039 - - adu:107484478 466.848