Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4018 ATGGCGGCGAAAAGGTTTTTGGATGATTCTGATGATCGAGACCAAGATAAGCCAAACGACAAACGGTTTAGATCTAATAGACCTACTTTGGCTTCGGTAATAACCGAAGTTGTTACAATGAAAAACTTGCAAAACTTGTTTTCAGTAGCCTTGGAACCTGTGCTCAAGAGAGTGGTGAGTGAAGAGGTTGATAGAGCGATGAGGCAATGGTGTTCTTGTTCTTCGTCGTCAAGGTCCTTAACAAGGACACCATCATTGAGAATCAAAGCATTTGACGATGATCAACCATCATCAACCTTGCAACTGGTCTTCAGCAAGAGGCTATCCCTTCCAATCTTCACCGGAAGCCGAATCCTCGACGTCGAAGGCAACCCTATAAGCATACTTCTGATGGACAAGAGCAGTGGCCAGATGGTTCCAACAAGCCTCCCACACCCAATCAAGCTGGAACTCCTCGTCCTCGACGGCGATTTCCCTCTTTCTGATAATGACAACTCTTCTTCATCTTCTTCGTCTTCTTGTGGTTGGAGTAGTGAAGAATTCAATAGCCGCATAGTGAAGGAGAGAACTGGCAAGAGACCTTTGCTTGCCGGAGAGTTGAACCTCACCATGAGGGATGGCATTGCACCAACTGGGGACATTGAGTTCACCGATAATAGTAGCTGGATTCGCAGCCGGAAGTTCCGGGTTGCCGTTAGGGTGGCTCCGGGGACTAACCACCATGCTCTTGCAATTCGAGAAGGCATTACTGAAGCTTTTGTTGTCAAGGATCACCGTGGAGAATTGTATAAAAAACATCATCCACCAATGCTAAATGACGAAGTGTGGCGGCTAGAAAAGATTGGAAAAGATGGAGCTTTCCACAAAAAATTGAGCTCAGAAGGGATCAAAACTGTTCAAGACTTTCTCAAACTATCAGTTATTGATCCTCATAGGCTAAGAAAGATTTTGGGCATTGGGATGTCAGATAAAATGTGGGAAGTGACAATCAAGCATGCAAAGACTTGTGAAATGGGAAGCAAGATCTACATCTACCGTGGCCCTCATTTCACTCTTTTTCTTAATCCAATTTGCCAATTAATTAAAGCTGATGTCAATGGCCACACATTTCCTACCAAAGAGCTTACCAATTTGAATAGGACTTATATAGAGAAGTTGGTGAGAGAAGCATACGCTAAATGGCAAAACTTGGAGGAATTTGATGGGGTTTTGAATGATAACATTGCTTTGTTAACCCAAGGTGATGCAAATATGGAGCAATATCAAAATAATCATCCAGGTTCGGTGGTAACATATGATAGCAACGATTATTATGGTGACAAATCTACTGCCAGCTATGTACCAAGTAATAACAACAATGATAATAGTGCACTAATAATGGGGTCCATGGAGTGGTCCCTGAATAATAGTAACCCAGGATACACCACAGCATCATTCACCAATGGATTTCCCTATGGATTTTCATCAGGATCTCAATCGGACGGTGATATAACACCCACTTCAGGTTGTGTCATTGACGAGGCTCCAAGGAGACATATTTAG 1542 0.4313 MAAKRFLDDSDDRDQDKPNDKRFRSNRPTLASVITEVVTMKNLQNLFSVALEPVLKRVVSEEVDRAMRQWCSCSSSSRSLTRTPSLRIKAFDDDQPSSTLQLVFSKRLSLPIFTGSRILDVEGNPISILLMDKSSGQMVPTSLPHPIKLELLVLDGDFPLSDNDNSSSSSSSSCGWSSEEFNSRIVKERTGKRPLLAGELNLTMRDGIAPTGDIEFTDNSSWIRSRKFRVAVRVAPGTNHHALAIREGITEAFVVKDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSSEGIKTVQDFLKLSVIDPHRLRKILGIGMSDKMWEVTIKHAKTCEMGSKIYIYRGPHFTLFLNPICQLIKADVNGHTFPTKELTNLNRTYIEKLVREAYAKWQNLEEFDGVLNDNIALLTQGDANMEQYQNNHPGSVVTYDSNDYYGDKSTASYVPSNNNNDNSALIMGSMEWSLNNSNPGYTTASFTNGFPYGFSSGSQSDGDITPTSGCVIDEAPRRHI* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4018 513 MobiDBLite consensus disorder prediction 1 24 - -
Amo05g4018 513 PANTHER PROTEIN, PUTATIVE-RELATED 1 505 - -
Amo05g4018 513 Pfam Calmodulin binding protein-like N-terminal domain 100 258 IPR046831 -
Amo05g4018 513 PANTHER OS02G0177800 PROTEIN 1 505 IPR012416 GO:0005516
Amo05g4018 513 MobiDBLite consensus disorder prediction 490 513 - -
Amo05g4018 513 Pfam Calmodulin binding protein central domain 270 336 IPR046830 -
Amo05g4018 513 Pfam Calmodulin binding protein C-terminal domain 341 400 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4018 Amo-Chr5 107858078 107863181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4018 3 402 Calmodulin-binding Proteins AT5G57580 46.898 1.24e-112 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4018 - - aip:107644281 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2523 13 45459287 45461622 Amo05g4018 05 107858078 107863181 PCT
Amo05g4018 05 107858078 107863181 Amo13g2523 13 45459287 45461622 PCT