Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4009 ATGGCTCCTGAATATGCATTGCGTGGATATCTATCCGTGAAGACAGATGTTTTCAGTTTTGGGATCTTGGTGTTGGAAATAGTTAGCGGGAGGAAAAATCACGACGTGCAATTTGGTGTAGAAAAGGCTGATCTCTTGAATTATGCATGGATACTTCATCAGGGAGGAAAAGTTATGGATTTAATTGACCAAACTCTTGGTAGATACAACCCTGATGAGGCAGCAATGTGCATTCAGCTTGGATTGTTGTGCTGTCAAGCAAGTATAGTAGATAGGCCTGACATGAATTCTGTTCATCTCATGCTCTCAAGTGATTCTTTTACATTGCCAAGGCCAGGTAGACCCGGAATCCATGGCCGTGTCGGACATTGGACCACAACCACCACCTCTGCTTTTACCAATACTAATGCTAGTAGTGGAACCAAGGCTTCAGGAGGTAGTAGGGTTTCAGGAGCTAGTAGCTATGTGGAGGATTTTTCTAGGAATTCTATCTCCACTTCTTCTTTTGATGAAGGCAGATGA 522 0.433 MAPEYALRGYLSVKTDVFSFGILVLEIVSGRKNHDVQFGVEKADLLNYAWILHQGGKVMDLIDQTLGRYNPDEAAMCIQLGLLCCQASIVDRPDMNSVHLMLSSDSFTLPRPGRPGIHGRVGHWTTTTTSAFTNTNASSGTKASGGSRVSGASSYVEDFSRNSISTSSFDEGR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4009 173 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 171 - -
Amo05g4009 173 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
Amo05g4009 173 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 171 - -
Amo05g4009 173 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Amo05g4009 173 MobiDBLite consensus disorder prediction 129 153 - -
Amo05g4009 173 Pfam Protein tyrosine and serine/threonine kinase 1 99 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4009 Amo-Chr5 107687165 107690433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4009 1 138 Receptor kinase-like Gene Family AT4G23150 41.727 1.48e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo05g4009 PK_Tyr_Ser-Thr 1.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4009 - - aprc:113868075 274.633