Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3991 ATGCGATTAAGCTGCAACGGTTGTCGTGTCCTTCGCAAGGGTTGCAACCTTGAATGCCCCATTAAACCCTGCCTCAATTGGATCAAATCGCCCGAATCACAGTCCAACGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCTGGCCTCCTCAACCTCCTCACCGCCGGCGACCCCAAGATCCGCCCAGCTATTTTTAAATCTTTGCTATACGAAGCTTGCGGCCGGATAGTGAACCCGGTTTTCGGTTCGACCGGGTTGCTATCGACTGGGAGCTGGCACTTGTGCGAAGCAGCTGTTGAAGCCGTTCTTAGCGGCGCGCCGATTAGACAACAGGATGCTTCAGATGGCGGTGGCCAGCTGCTAAACCCGTCTGATATTCGCCACGTGGTGAAGAGGGGGAAATCTTGCAGCTCCGATCATGTCCTTAAGCCCCGGAAGAGCCAGTTCAAGAGGCGCGCTGAGAAGTCAAAGCCGGAGCCGGAGCCGGAGGTTGAGCTGGATCAGGGTGTAGCTGAGTTGGTGGTGGAGGCTTGCGTAGTGAATGAGTTAGATGACTCGGCGAGCCCTGACTCAGGGTCTGGGCTGAGTGAGCACGTAAGTGTTGTTGTTGGCGGCGGCGCAGAAGCTGATAGCGGCTCAATTGAGAGTGTCAATCCGGCTCGAGCCGATGACGGGGAGCTTGAGCTGGAGCTGACTTTGGGGTGTCAGTGGCTTTGA 720 0.5694 MRLSCNGCRVLRKGCNLECPIKPCLNWIKSPESQSNATLFLAKFYGRAGLLNLLTAGDPKIRPAIFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVEAVLSGAPIRQQDASDGGGQLLNPSDIRHVVKRGKSCSSDHVLKPRKSQFKRRAEKSKPEPEPEVELDQGVAELVVEACVVNELDDSASPDSGSGLSEHVSVVVGGGAEADSGSIESVNPARADDGELELELTLGCQWL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3991 239 MobiDBLite consensus disorder prediction 139 167 - -
Amo05g3991 239 MobiDBLite consensus disorder prediction 186 226 - -
Amo05g3991 239 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Amo05g3991 239 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Amo05g3991 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 237 - -
Amo05g3991 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3991 Amo-Chr5 107314132 107315667 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3991 1 234 AS2 family AT3G02550 45.833 1.06e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo05g3991 LOB 1.5e-21 No_clan