Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3977 ATGGTAGCCATACTCCTTGGCATATTAGTATTTATAGTCGCCATTATTGTTTGGCTGCATCCAAAGGATAATCGAAATAAAGTTCCACCAGGTCCGAAGGCATTGCCACTCATCGGTAACCTCCACATGCTACGAAAACAACCACACCGCACCCTCCAAGCCCTCGCCGCGAAATACGGACCCATAATGTTCTTGAAGCTAGGGCAAGTTCCAACTGTCGTTGTTTCTTCTCCAGAAGCTGCTGAGCTCTTTCTCAAGACCCATGACCTAGATTTTGCAAACAGGCCTAAATTTCAGGTTGTGGAGACGTTTTTCAGTGGCAGTAAGGGCATTGGGATGTCACAGTACGGTTGGTATTGGCGGCACGTGAGGAAGTTGTGCACATTGCAACTTTTGAGTGGATCAAAAGTTGAGATGTATGGTCCTTTAAGGAGGAAAGAGTTGGGAATGTTGGTGAAGTCTTTATGCAATGCTTCTGCGTCGGGTGAGGTTTTGAATCTTAGTGTGATGCTGAAGGAGTTTGCTGAGAATATCACTTACAATATGGTATTCGGTCGAAGCCATGACAATAATAGGTTCAACTTAGAGGCCCTTGTTGACTTAGTCGGTTCTGCTGGAGCTTTCAATATTGCGGATTATGTGCCTATCCTTGGCATCTTTGATTTTCAGGGAATAAGAAAGAAAGTAAATAAATTAAGAAAGCCAATTAACGAGGCACTGGAGCATATTATTGAAGATCATCAGAATACCAACTACGATGATGATGATRATAGTCCACAGAAAAAGGATTTTGTTGACATATTGCTATCATTTTTGGATCAACCCATGGATCCTGATGAAGAACAACACAAACACGTTCTGACAAGAAATGACATCAAGGCTATTATGATGGACATGATTGGTGCAGCATATGAAACATCAACTTCGGCAATTGAATGGGTAATGTCAGAGCTACTAAAGCATCCTAGTGTGATGAAGAAACTTCAACACGAGATACAACATGCAGTGGGAGGAATTAACAAAGAAGTTGAAGAGAATGAAATAGAGAATATGCCTTATTTGGATATGGTTGTGAAAGAGACCTTAAGATTATACCCGGTTGCACCTTTGTTAGTGCCTCATGTGTCTCGAAACGACGTCGTTATTGAAGGTTATTACATAAAAAGAAATACACAAATCATAATAAACGCATGGGCAATTGGAAGGGATCCAAGAGTTTGGTCAGAAAATGCAGAGAAGTTCTATCCAGAGAGATTCGAACATAATAATGTAGACATTCTTGGACGCGACTTTAGATTCATACCATTTGGTTCTGGTCGAAGAGGGTGCCCTGGAGCTCAATTGGGATTTGCAACTATCAAGTTTGTTGTGGCTCAGTTGGTGCATTGCTTTAACTGGGAGCTTCCTTTTGGCATGTCTTGTGATGAATTAGACATGAATGAAACATTTGGCATCACTATACCAAGAACTACACACTTGCTAGCTATTCCAACTTTCAGGCTAACAGCTGAAGCTGCTAGTAACAAAGAATAA 1533 0.4116 MVAILLGILVFIVAIIVWLHPKDNRNKVPPGPKALPLIGNLHMLRKQPHRTLQALAAKYGPIMFLKLGQVPTVVVSSPEAAELFLKTHDLDFANRPKFQVVETFFSGSKGIGMSQYGWYWRHVRKLCTLQLLSGSKVEMYGPLRRKELGMLVKSLCNASASGEVLNLSVMLKEFAENITYNMVFGRSHDNNRFNLEALVDLVGSAGAFNIADYVPILGIFDFQGIRKKVNKLRKPINEALEHIIEDHQNTNYDDDDXSPQKKDFVDILLSFLDQPMDPDEEQHKHVLTRNDIKAIMMDMIGAAYETSTSAIEWVMSELLKHPSVMKKLQHEIQHAVGGINKEVEENEIENMPYLDMVVKETLRLYPVAPLLVPHVSRNDVVIEGYYIKRNTQIIINAWAIGRDPRVWSENAEKFYPERFEHNNVDILGRDFRFIPFGSGRRGCPGAQLGFATIKFVVAQLVHCFNWELPFGMSCDELDMNETFGITIPRTTHLLAIPTFRLTAEAASNKE* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3977 510 Gene3D Cytochrome P450 17 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 Pfam Cytochrome P450 29 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 SUPERFAMILY Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Amo05g3977 510 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 502 - -
Amo05g3977 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 502 - -
Amo05g3977 510 Coils Coil 504 510 - -
Amo05g3977 510 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3977 510 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3977 Amo-Chr5 106973495 106982397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3977 25 498 Cytochrome P450 AT5G24950 37.422 9.72e-116 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3977 - - adu:107490367 747.658