Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3969 ATGATAACCATTCTCCTTGGCATATTAGTATTTGTAGTCGCCATTGTTTTGTTGCATCCAAAGGATGATCGGAATAAAGTTCCACCACCTGGCCCCAAGGCATTGCCACTCATCGGTAACCTCCACATGTTAGGAACACAACCACACCGCAGCCTCCAAGCCCTCGCCGAAAAATACGGACCCATAATGTTCTTGAAGCTAGGGCAAGTTCCAACTGTAGTTGTTTCTTCTCCGGAAGCTGCTAAGCTATTCCTCAAGACTCATGACCTAGATTTTGCAAACAGGTCTAAATTTCAGGCCGTGGAGATGTTTTTCAATGGCGGAAAGGGCATTGGGATGGCACAGTACGGTTGGTATTGGCGGCACATGAAGAAGTTATGCACATTGCAACTTTTAAGTGGATCAAAGGTTGAGATGTATGGTCCTTTAAGGAGGAAGGAATTGGAAATGTTGGTGAAGTCTCTATGCAATGCTTCTGCGTCAGGTGAGGTTGTGAATCTTAGTATGATGTTGAAGGAGCTTTCTGAGAATATCACATTCAAGATGGTGTTGGGTCGAAAGCATGAAAGTAATAGGTTCAACTTAAAGGCCCTTGTTGACTTAGTCAGCTTGGCTGGAGCTTTCAATATTGCAGATTACGTGCCTATCCTTGGCATCTTTGATTTTCAGCTACCAATTGATTGTTTGGGAATAAGAAAGAAAGTAAATAAATTAAGAAAATCAATTGACGATACATTGGAGTATATTATTGAAGATCATCAAAATACCAACTACGATGATGATAATAATAGTCCACAGAAAAAGGATTTTGTTGACATATTGCTATCATGTTTGGATCAACCCATGGATCCTGATGAAGAACACGAACATGTTATAACAAGAAATGACATCAAGGCTATTATAATGGACATGATTGGTGCAACATATGAATCATCAACTTCGGCAATTGAATGGGTTATGTCAGAGCTACTAAAGCATCCAAGTGTGATGAAGAAACTTCAACATGAGATACAACATGTAGTTGGAGGAATTAATAAACAAGTTGAAGAGAGTGAAATAGAGAATATGCCTTATTTGGATATGGTTGTGAAAGAGACCTTAAGATTATACCCAGTTGCACCTTTGCTATTGCCTCATGAATCTCGAAACGACGTCGTTGTTGATGTTTGGTCAGAAAATGCAGAGAAGTTCTATCCAGAGAGATTTGAACATGATAATGTAGACATTCTTGGACGTGACTTTAGATTCATACCATTTGGTTCTGGTCGAAGAGGGTGCCCTGGAGCTCAATTGGGATTTGCAACTATCAAGTTTGTTGTGGCTCAGTTGGTGCATTGCTTTAACTGGGAGCTTCCTTTTGGCATGTCTTGTGATGAATTAGACATGAATGAAACATTTGGCATCACTATACCAAGAACCACACACTTGCTAGCTATTCCAACTTTTAGGCTAACAGCTGAAGCTGCTAGTAACAAAGAATAA 1482 0.4001 MITILLGILVFVVAIVLLHPKDDRNKVPPPGPKALPLIGNLHMLGTQPHRSLQALAEKYGPIMFLKLGQVPTVVVSSPEAAKLFLKTHDLDFANRSKFQAVEMFFNGGKGIGMAQYGWYWRHMKKLCTLQLLSGSKVEMYGPLRRKELEMLVKSLCNASASGEVVNLSMMLKELSENITFKMVLGRKHESNRFNLKALVDLVSLAGAFNIADYVPILGIFDFQLPIDCLGIRKKVNKLRKSIDDTLEYIIEDHQNTNYDDDNNSPQKKDFVDILLSCLDQPMDPDEEHEHVITRNDIKAIIMDMIGATYESSTSAIEWVMSELLKHPSVMKKLQHEIQHVVGGINKQVEESEIENMPYLDMVVKETLRLYPVAPLLLPHESRNDVVVDVWSENAEKFYPERFEHDNVDILGRDFRFIPFGSGRRGCPGAQLGFATIKFVVAQLVHCFNWELPFGMSCDELDMNETFGITIPRTTHLLAIPTFRLTAEAASNKE* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3969 493 SUPERFAMILY Cytochrome P450 29 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PANTHER CYTOCHROME P450 FAMILY PROTEIN 388 485 - -
Amo05g3969 493 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Amo05g3969 493 PANTHER CYTOCHROME P450 93A3-LIKE 2 388 - -
Amo05g3969 493 PANTHER CYTOCHROME P450 93A3-LIKE 388 485 - -
Amo05g3969 493 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 388 - -
Amo05g3969 493 Gene3D Cytochrome P450 15 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 Pfam Cytochrome P450 388 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 Pfam Cytochrome P450 29 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3969 493 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3969 Amo-Chr5 106852166 106860228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3969 29 481 Cytochrome P450 AT2G30770 39.040 1.29e-107 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3969 - - ahf:112799795 744.191