Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3965 AGCACCGCATTGCCGACCCGAACAACTGAAAAGAAAAAGGTTGCACAAAAAACTCAAAAGGATTCAGAAATGCTACCACAAGTATTAGCTATTCCTGCAGCAATGCTCCTTGTGATATTCACATTCATCATTCTAACACCATTTGTGTTGAATCCAGCTAATGGGAGTAGCAAAAAACTCCCACCAGGTCCAAAACCTTTACCAATTATTGGTAACCTTCACATCTTAGGAAAACTCCCACATCGCACCCTTGAGACCCTTGCCACTAAATATGGACCCATAATGTCCCTAAAGTTAGGACAAGTCCCTGTGGTTGTGGTTTCTTCTCCAGAAATTGCTAAGCTCATTCTGAAAACTCATGACTTGGTTTTCGCAAACCGGCCTAAGGTTCAGGTAGTAGAAACTCTTTCTTATGGCCGAAAGGGATTGGTGTTTACGGAGTATGGTGGTTATTGGCGCAACGTGAGGAAGTTGTGCAGCTTGCAACTTCTAAGTGCATCAAAGGTTGAGATGTTTGGTCCTTTGAGGAAGAAGGAGTTGGGAATGTTGGTGAATACACTTAAGAAGGCTTCGGATTCATGTGAGGTTGTGGATCTTAGTCAATTGATTGGGGAGTTTGCTGAAAATATCACTTTTAACATGATATTGGGTCGTAGCAAGGATAATCGGTTTGACCTCAAGGGCCTCATTCATGAGATTATGTTCTTGGTTGGTGCCTTCAATCTTGCAGATTATGTGCCTATCTTAGGTACGTTTGATCTTCAGGGATTAAAGAGAAGAACAAAGAAAGCAAGCAAGGCCATTGATGAAGCATTAGAGCACATCATCAATGATCACGATCACCCATCATCAGCTGAATTTCCACAGGATAACAAGGATTTTATAGACATATTACTCAGCTACATAAATCAACCAATGGACCCACATGATCATGAACAAAGACATGTAGTTGGGAGAACCAATATAAAGGCTATCATATTAGACTTAATTGCTGGATCATACGACACTTCTTCAATAGCAATTGAATGGGCTATGTCAGAGCTTTTAAAAAATTCAAGAATAATGAAGAAACTTCAAAACGAGATTGAAGGCCTTGTGGGAATGAATAGACAAGTGGAAGAAAATGACTTGAAAAAATTGCCTTACCTTGACATGGTTGTAAAGGAGATATTACGATTATATCCTGTTGGACCATTTCTTGTGCCACACGAGTCTACAGAAGATGTTACTATAAATGGTTATTTTATAGAGAAAAATACACGAATTATGGTGAATGCATGGGCAATAGGGAGAGATCCAAGAGTTTGGTTAGAAAATAATGACATGTTTTTTCCTGAAAGATTTGAGAACAACGATGTAGATTTTAAAGGGCATGATTTTAGACTCATACCATTTGGGTCAGGTCGTAGAGGGTGTCCTGGGATGAATATGGGTTTAACTACCATTAAGATTACTATAGCACAATTAGTGCATTGTTTTAGTTGGGAACTTCCATTGGGTATGACTCCAGAGAATTTAGATATGACTGAAGAATTTAGACTCTCTATACCAAGAAGTAAGCATTTATTATGTAGGCCAACTTATCGCCTACTTAGTGATGATTAA 1605 0.3894 STALPTRTTEKKKVAQKTQKDSEMLPQVLAIPAAMLLVIFTFIILTPFVLNPANGSSKKLPPGPKPLPIIGNLHILGKLPHRTLETLATKYGPIMSLKLGQVPVVVVSSPEIAKLILKTHDLVFANRPKVQVVETLSYGRKGLVFTEYGGYWRNVRKLCSLQLLSASKVEMFGPLRKKELGMLVNTLKKASDSCEVVDLSQLIGEFAENITFNMILGRSKDNRFDLKGLIHEIMFLVGAFNLADYVPILGTFDLQGLKRRTKKASKAIDEALEHIINDHDHPSSAEFPQDNKDFIDILLSYINQPMDPHDHEQRHVVGRTNIKAIILDLIAGSYDTSSIAIEWAMSELLKNSRIMKKLQNEIEGLVGMNRQVEENDLKKLPYLDMVVKEILRLYPVGPFLVPHESTEDVTINGYFIEKNTRIMVNAWAIGRDPRVWLENNDMFFPERFENNDVDFKGHDFRLIPFGSGRRGCPGMNMGLTTIKITIAQLVHCFSWELPLGMTPENLDMTEEFRLSIPRSKHLLCRPTYRLLSDD* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3965 534 Coils Coil 254 274 - -
Amo05g3965 534 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 Gene3D Cytochrome P450 49 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 Pfam Cytochrome P450 61 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 Coils Coil 355 375 - -
Amo05g3965 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Amo05g3965 534 PANTHER CYTOCHROME P450 CYP736A12-LIKE 34 530 - -
Amo05g3965 534 SUPERFAMILY Cytochrome P450 61 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3965 534 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 34 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3965 Amo-Chr5 106810422 106813750 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3965 55 518 Cytochrome P450 AT3G48310 38.925 1.28e-119 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3965 - - aprc:113867069 668.692