Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3961 ATGCTACAAGTATTAGCTATCCCTGCAGCAATTCTCCTTGTGATATTCACATTCATCATTCTATCACCGTTTGTGTTGAATCACGCAAATGGGAGTACTAAAAAACTGCCACCGGGAAAACTCCCACACCGCACCCTTGCGGCTCTTGCCACTAAATATGGACCCATAATGTCCCTAAAGTTAGGACAACTCCCGGTGGTTGTGGTTTCTTCTCCAGAAGTTGCTGAGCTCGTTTTGAAAACTCACGACTTGGTTTTTGCAAACCGGCCTAAGCTTCAGGTAGTAGAAACTCTTTCTTATGGCCGAAAGGGGTTGGTGTTTACGGAGTACGGTGGTTATTGGCGCAACGTGAGGAAGTTGTGCACCTTGCAACTTCTAAGTGCATCAAAAGTTGAGATGTTTGGTCCTTTGAGGAAGAAGGAGTTGGGAATGTTGGTGAATACACTTAAGAAGGCTTCGGATTCACGTGAGGTTGTGGATCTTAGTCAGTTGATTGGGGAGGTTGTTGAAAATGTCACTTTTAACATGATATTGGGTCGTAGCAAGGACAATAGGTTTGACCTCAAGGGCCTCATTCATGAGGTTATGTACTTGATTGGTGCCTTCAATCTTGCAGATTATGTGCCTATCTTAGGTTCATTTGATCTTCAGGGACTAAAGAGAACAACAAAAAAAGTAAGCAAAGCCATTGATGAAGCATTGGAGCATATCATCAACGATCACGATCACCATTCATCAGATGAATCCCCACAGCATAACAAGGATTTCATAGATATATTACTCAGCCACATGAATCAAACAATGGACCCAAATGATCATGAACAAAGATACGTAGTTGGAAGAACCAATATAAAGGCTATTGTATTGGACTTAATTGCTGGAGCATATGACACTTCTAAAACTGCAATTGAATGGGGTATGTCAGAGCTCTTAAAAAATTCAAGAATATTGAAAAAACTTCAAAACGAAATCGAAGTCTTTGTGGGAATAAATAGACAAGTCGAAGAAAAAGATTTAGAAAAATTGCCTTACCTTGACATGGTTGTGAAGGAGACATTGCGATTATACCCTGTTGGACCATTTCTTGTGCCACACGAGTCATTAGAAGATGTTACTATACATGGTTATTTTATCGAAAAAAATACACGGATCATGGTGAATGCATGGGCAATAGGGAGAGATCCAAGAGTTTGGTCGGAAAATAGTGACATATTTTTCCCAGAAAGGTTTGAGAACAATAATGTAGATGTTAAGGGGCATGATTTTAGACTCATTCCGTTTGGGTCAGGTCGTAGAGGGTGTCCTGGGATGAATATGGGTTTAACTACCATTAAGATTGTTATAGCACAATTAATACATTGTTTTAGTTGGAAACTTCCATTGGGTATGGCTTCGAAGGATTTAGATATGACTGAAAAATTTGGACTCTCTATACCAAGAAGTAAGCACTTACTAGGTAGGCCAACTTATCGCTTACTTAGTGAAGCTTAA 1491 0.3991 MLQVLAIPAAILLVIFTFIILSPFVLNHANGSTKKLPPGKLPHRTLAALATKYGPIMSLKLGQLPVVVVSSPEVAELVLKTHDLVFANRPKLQVVETLSYGRKGLVFTEYGGYWRNVRKLCTLQLLSASKVEMFGPLRKKELGMLVNTLKKASDSREVVDLSQLIGEVVENVTFNMILGRSKDNRFDLKGLIHEVMYLIGAFNLADYVPILGSFDLQGLKRTTKKVSKAIDEALEHIINDHDHHSSDESPQHNKDFIDILLSHMNQTMDPNDHEQRYVVGRTNIKAIVLDLIAGAYDTSKTAIEWGMSELLKNSRILKKLQNEIEVFVGINRQVEEKDLEKLPYLDMVVKETLRLYPVGPFLVPHESLEDVTIHGYFIEKNTRIMVNAWAIGRDPRVWSENSDIFFPERFENNNVDVKGHDFRLIPFGSGRRGCPGMNMGLTTIKIVIAQLIHCFSWKLPLGMASKDLDMTEKFGLSIPRSKHLLGRPTYRLLSEA* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3961 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Amo05g3961 496 Gene3D Cytochrome P450 25 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 Coils Coil 317 337 - -
Amo05g3961 496 Pfam Cytochrome P450 31 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PANTHER CYTOCHROME P450 FAMILY PROTEIN 39 491 - -
Amo05g3961 496 PRINTS E-class P450 group I signature 50 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS E-class P450 group I signature 74 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3961 496 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 39 491 - -
Amo05g3961 496 SUPERFAMILY Cytochrome P450 38 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3961 Amo-Chr5 106760557 106781649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3961 40 494 Monolignol Biosynthesis Gene Families AT4G36220 38.412 1.36e-112 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3961 - - aprc:113866792 632.484