Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3935 ATGGATTCGAAGGATCACAAGGCTGAGGGTGTTGTTGTTCTTGATGTTCCCCAGGATCATGGGGTGAACTTCTCAACCCGGAGAGAGTTTGGAACAAAACTCAAATCCGGGTTGAGAGAAACGTTCTTCCCTGATGATCCCTTCCGGCAGTTCAAGAACGAGGAGAGGCGGTGGCGAAGGGTGGTGAAAGGGGTTGAATACTTTGTTCCGATATTCGAGTGGCTTCCGAATTACTCAATGCGGCTTTTTTGGTCGGATTTGATTGCCGGACTCACCATAACAAGCCTGGCCATCCCTCAGGGGATTAGTTATGCCAAACTCGCCAACCTTCCTCCCGTTATTGGCCTTTATTCAAGCTTTGTCCCACCTCTAGTGTATGCTATATTTGGAAGCTCAAGGCACATGGCAGTGGGGACTATAGCGGCAGCATCTTTGCTTATTGGTCAAACTATTCAAACCGTSGCTGATCCTGTTCAGGAACCAACCTTGTTCCTTCACTTGGTCTTCACAACCACCTTTGTCACTGGTTTATTCCAAGCTTCTCTTGGTATTTTCAGACTTGGGATATTGGTTGATTTCTTTTCCCATTCTACCATCACTGGATTCATGGGTGGGACAGCAGTCATACTTATCCTCCAACAACTAAAGGGTATTTTTGGAATGACGCATTTTTCTACCAAAACAAATGTTGTATCGGTGATCAAGGGCATCATTGACAATAGACATGAGATAAGGTGGGAAACCATTGTTCTTGGCGTTATTTTTGTTTCTTTCCTCCAATTTACTGCGCATGTGAGAGAGAGAAAACCAAAGCTATTTTGGGTGTCAGCTATAGCTCCAATGACAACGGTAGTAGTTGCTGGAGTTTTCACGTATCTGGTTAAGGGCCAAAATCATGGAATAAAAATTGTGGGCCATTTAGATAAAGGAATAAACCCTTTGTCTATTCATTATTTGAACTTTGATTCTAAATATTTATCAGCTGTTCTCCGAGCTGGCATTATCACAGGCATTTTGTCATTGGCGGAAGGAATAGCAATAGGAAGAAGCTTTGCTGTAACTGCTAATACACCTCATGATGGGAACAAAGAGATGGTAGCTTTTGGCCTTATGAACTTATGTGGTTCTTTCACCTCATGTTACTTGACTAGTGGACCGTTTTCGAAAACGGCGGTGAATTACAATGCAGGGTGTAAGACACCTATGACAAACGTGGTGCAGGGAGTGTTAATGGCGTTAACACTCTTGTTTTTGGCACCACTATTTGGACACACTCCTATTGTTGCTCTCTCATCTATTATTACATCTGCCATGCTTGGACTCATCAAATATGGTGTCTTTGTTCATCTCTTCAAAGTTGACAAGTTTGACTTTCTTATTTGCATGGCTGCCTTCTTAGGTGTCATCTTTCTAACCATGGATCAGGGCCTTATGATTTCTATTGCACTGAGCCTTCTTAGAGCACTCTTATATGTGGCTAGGCCTGCCACATGCAAGCTTGGAAAGTTAGATGACTCTTCAGGTTCATATAGAGATGTTGATCAATACACTCCTACAAAAACATACCCAGGAGTTTTGATTATTCAACTTGGTTCCCCCATTTACTTTGCAAATGCTATCTATGTCAAAGAAAGGATTATGAGGTACGTTAGAAGTGAAAAAGACTCTGATGGAGTTGTGGAGCAGATCATACTTGATTTTTCAGGAGTAACATCAATTGACATGACTGGTATCGAAGGATTGCTAGAAACTTATAGAGTATTAGAAAGGAATGGAATTCAGATGTTAATAGTGAACCCAAGACTTGAGGTTATGGAGAAGCTGGTGGCATCCAATTTTGTAGACAAGGTTGGGAAGGATTCATTCTATCTGAATTTGGATGATGCAGTGAATGCAACTCAATATTCACTTCGTTCACTCAAGACCAATAACAATAATATTAATGAAGAGACAACTCATCAACAATTACCCGATCATCATGCCTAA 1986 0.4159 MDSKDHKAEGVVVLDVPQDHGVNFSTRREFGTKLKSGLRETFFPDDPFRQFKNEERRWRRVVKGVEYFVPIFEWLPNYSMRLFWSDLIAGLTITSLAIPQGISYAKLANLPPVIGLYSSFVPPLVYAIFGSSRHMAVGTIAAASLLIGQTIQTVADPVQEPTLFLHLVFTTTFVTGLFQASLGIFRLGILVDFFSHSTITGFMGGTAVILILQQLKGIFGMTHFSTKTNVVSVIKGIIDNRHEIRWETIVLGVIFVSFLQFTAHVRERKPKLFWVSAIAPMTTVVVAGVFTYLVKGQNHGIKIVGHLDKGINPLSIHYLNFDSKYLSAVLRAGIITGILSLAEGIAIGRSFAVTANTPHDGNKEMVAFGLMNLCGSFTSCYLTSGPFSKTAVNYNAGCKTPMTNVVQGVLMALTLLFLAPLFGHTPIVALSSIITSAMLGLIKYGVFVHLFKVDKFDFLICMAAFLGVIFLTMDQGLMISIALSLLRALLYVARPATCKLGKLDDSSGSYRDVDQYTPTKTYPGVLIIQLGSPIYFANAIYVKERIMRYVRSEKDSDGVVEQIILDFSGVTSIDMTGIEGLLETYRVLERNGIQMLIVNPRLEVMEKLVASNFVDKVGKDSFYLNLDDAVNATQYSLRSLKTNNNNINEETTHQQLPDHHA* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3935 661 ProSiteProfiles STAS domain profile. 515 633 IPR002645 -
Amo05g3935 661 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Amo05g3935 661 TIGRFAM sulP: sulfate permease 70 629 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo05g3935 661 PANTHER SULFATE TRANSPORTER 18 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo05g3935 661 Pfam Sulfate permease family 83 464 IPR011547 GO:0016021
Amo05g3935 661 Gene3D STAS domain 494 636 IPR036513 -
Amo05g3935 661 PANTHER SULFATE TRANSPORTER 3.5-RELATED 18 643 IPR030316 GO:1902358
Amo05g3935 661 SUPERFAMILY SpoIIaa-like 518 632 IPR036513 -
Amo05g3935 661 Pfam STAS domain 518 629 IPR002645 -
Amo05g3935 661 CDD STAS_SulP_like_sulfate_transporter 516 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3935 Amo-Chr5 106255147 106265193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3935 17 641 Inorganic Solute Cotransporters AT5G19600 61.563 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3935 K17471 - gmx:100789107 904.049