Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3932 GTAAAAAACTTCATCCTCATTGGTGACATCCATAAAAGTATATACTTTCTTAGTTGGAAAGAGCAGGGTACTCAACTTAGCATATTGGCCAAAGATTTCGGTAATCTTGATTGCTTTGCAACCGAATTTCTGATTGATGGGAGTACTCTGAATCTCATAGTTTCAGATGATCAAAAGAACATCCAGGTTGTCACATTGTGGGATGTCTTGGATAGTTTGATTCATGTAACTGACCGCAATGTAACTTGGCTATCGCGTTGTATGTGTGTGCAGGTTAGCTTCACCGGTTCGACAGAGGTAGGCGGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGGTGAGATATGTGTTGCAAGTTCACGTGTGTTTGTTCAGGAAGGGATATATAATGAATTTGAGAAGAAGTTGGTAGAGAAAGCAAAAGCTTGGGTTGTTGGTGATCCTTTTGACCCTAAATCTCAGCAAGGCCCTCAGGTATATGGAAAATATTACCATATCATGTTATATCATTTTCGTCGTATTTTAAATAAATATACCTTACATTCATCATTTGTTGATAAAAAGCAATTTGAGAAAATTCTTTCCTACATAGAGCATGGAAAGAAAGAAGGAGCCACCCTTTTATATGGGGGTAAAAGATTAGGAGACAAGGGCTACTACATTGAGCCAACAATTTTCTCTGATGTTAAGGACATGCTTATAGTACAAGATGAAATATTTGGCCCTGTGATGTTACTAATGAAATTCAAAATTTGGATATTGCAAACACAGTGTCCAGATCCATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTCATATTTGGGAGTGACATTCCTTATGGAGGGTATAAACAGAGTGGATTTGGAAAAGAATATGTACCTGCAACAGAAATCTGTTGTAACTCCAATTTACAACTCTCCTTAG 936 0.3782 VKNFILIGDIHKSIYFLSWKEQGTQLSILAKDFGNLDCFATEFLIDGSTLNLIVSDDQKNIQVVTLWDVLDSLIHVTDRNVTWLSRCMCVQVSFTGSTEVGGEIMHAAASSNLKQGEICVASSRVFVQEGIYNEFEKKLVEKAKAWVVGDPFDPKSQQGPQVYGKYYHIMLYHFRRILNKYTLHSSFVDKKQFEKILSYIEHGKKEGATLLYGGKRLGDKGYYIEPTIFSDVKDMLIVQDEIFGPVMLLMKFKIWILQTQCPDPFVQALFGSTAISYLGVTFLMEGINRVDLEKNMYLQQKSVVTPIYNSP* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3932 311 Pfam CPSF A subunit region 2 66 IPR004871 GO:0003676|GO:0005634
Amo05g3932 311 Pfam Aldehyde dehydrogenase family 114 253 IPR015590 GO:0016491
Amo05g3932 311 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 99 256 IPR016163 GO:0016620
Amo05g3932 311 SUPERFAMILY ALDH-like 92 253 IPR016161 GO:0016491
Amo05g3932 311 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 187 254 - -
Amo05g3932 311 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 115 171 - -
Amo05g3932 311 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 115 171 - -
Amo05g3932 311 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 187 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3932 Amo-Chr5 106185891 106189026 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3932 91 311 Aldehyde Dehydrogenase Gene Family AT3G24503 44.637 7.52e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3932 K12355 - gmx:100783920 219.55