Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3928 TCCCTACTTGTATTCTCCCATTCACTTGCTCAATCTAAAAAGCCTTCATCTATTTATCTTTTATTCTTTCTGTCACTAGAATCTGCCTTGATAACAAAACCAAATATGTCTAATGATATCTCCGATGGCCACGTCAAGATTCCCACCACCGTGAAGTTCACCAAGCTCTTCATCAATGGACAATTTGTCGATTCCCTTTCAGGGAGTGAGTTTGAGACAATAGATCCAAGAACAGGAGAGGTAATTGCGAGAATCTCGGAAGGAAGAAAAGAAGATATTGATGCTGCCGTCAAAGCGGCGCGTGAAGCATTTGACACCGGTCCATGGCCTCGCATGGCCGGAGCTAAGAGGGCCAAAATCATGCTGAAATGGGCAGATCTGATTGATCAAAACGCATCAGAGTTAGCAGCATTGGATGCCATTGATGCTGGAAAGTTGTACAATAGGTGCAAGGCCCAAGAAATTCCTGCAGCAGCGAATATGCTACGCTACTATGCCGGTGCTGCCGATAAGATCCATGGTGAGGTGCTAAAAGCTTCTGGAGAGTTCCATGCATATACTTTGATGGAACCGGTTAGTCCAGCATTGGCTGCTGGTTGCACCATGGTACTTAAACCTGCCGAACAAACACCGCTGTCGGCTTTGTTTTATGCTCATTTAGCTAAGCAGGCTGGAATTCCAGATGGTGTGCTCAATGTAGTACCAGGATTTGGACCTACTGCTGGTGCCGCAATATCCTCACACATGAATGTTGACAAGGTTAGCTTCACCGGTTCGACGGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCACAGGTGAGATATGTGTTGCAAGTTCACGTGTGTTTGTTCAGGAAGGGATATATGATGAATTTGAGAAGAAGTTGGTAGAGAAAGCAAAAGCTTGGGTTGTTGGTGATCCTTTTGACCCTAAATCTCAGCAAGGCCCTCAGGTTGATAAAAAGCAATTTGAGAAAATTCTTTCCTACATAGAGCATGGAAAGAAAGAAGGAGCCACCCTTTTATATGGGGGTAAAAGATTAGGAGACAAGGGCTACTACATTGAGCCAACAATTTTCTCTGATGTTAAGGGGGACATGCTTATAGCACAAGATGAAATATTTGGCCCTGTGATGTCACTAATGAAATTCAAGACTATTGAAGAGGCAATTATGAGGGCTAATAACACCAAGTATGGGCTAGCAGCAGGAATTGTGACAAAGAATTTGGATATTGCAAACACAGTGTCCAGATCCATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTCATATTTGGGAGTGACATTCCTTATGGAGGGTATAAGCAGAGTGGATTTGGAAGAGAATATGGAATGCAAGCACTCCACCAGTACCTGCAACAGAAATCTGTTGTAACTCCAATTTACAACTCTCCTTGGCTTTGA 1533 0.4364 SLLVFSHSLAQSKKPSSIYLLFFLSLESALITKPNMSNDISDGHVKIPTTVKFTKLFINGQFVDSLSGSEFETIDPRTGEVIARISEGRKEDIDAAVKAAREAFDTGPWPRMAGAKRAKIMLKWADLIDQNASELAALDAIDAGKLYNRCKAQEIPAAANMLRYYAGAADKIHGEVLKASGEFHAYTLMEPVSPALAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMNVDKVSFTGSTEVGREIMHAAASSNLKQVSLELGGKSPLLIFDDADVDKAASLALLGTGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKSQQGPQVDKKQFEKILSYIEHGKKEGATLLYGGKRLGDKGYYIEPTIFSDVKGDMLIAQDEIFGPVMSLMKFKTIEEAIMRANNTKYGLAAGIVTKNLDIANTVSRSIRAGIVWINCYFIFGSDIPYGGYKQSGFGREYGMQALHQYLQQKSVVTPIYNSPWL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3928 510 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 188 283 IPR016162 GO:0016491
Amo05g3928 510 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 48 187 IPR016162 GO:0016491
Amo05g3928 510 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 280 287 IPR029510 GO:0016491
Amo05g3928 510 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 39 510 - -
Amo05g3928 510 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 39 510 - -
Amo05g3928 510 Pfam Aldehyde dehydrogenase family 189 500 IPR015590 GO:0016491
Amo05g3928 510 SUPERFAMILY ALDH-like 48 506 IPR016161 GO:0016491
Amo05g3928 510 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 284 505 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3928 Amo-Chr5 106151085 106163295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3928 45 510 Aldehyde Dehydrogenase Gene Family AT3G24503 69.450 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3928 K12355 - gmx:100783920 789.645