Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3927 ATGACAGCTCTTTCCAACGGCCACGCCGCTAATAACTCTTCTCCTCTTTTCAAGATCCCACCCATCAAATTCACCAATCTCTTCATCAATGGCCACTTTGTTCATTCTCTCTCAGGAAACGAGTTTGAGACAATAGATCCGAGAACAGGAGAGGTAATAGCAAAAATCTCGGAGGGAAGAAAAGAAGACATTGATGTGGCTGTTAAAGCGGCACGTGAGGCATTTGACAACGGTCCATGGCCACGCATGTCTGGTGCGGAAAGAGCAAAAATCATGATGAAATGGGCAGATCTTATTGAAGAAAACGTAGAAGAACTAGCAGCATTAGACGCCATTGATGCTGGAAAGTTGTACCACTTAGTTAAGGTCTTGGACATCCCTGCAGTTGCAAATTGTTTACGCTACTATGCCGGTGCTGCCGATAAGATCCATGGCGAGGTGCTAAAAGGTGCTAGAGAGCTCCATGCATATACTTTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCTTGGAATTTCCCTAGCACCATGTTTGCTGCCAAGGTTAGTCCTTCCTTGGCTGCCGGTTGCACCGTCGTCCTTAAGCCGGCCGAACAAACACCTCTCTCGGCTCTGTTTTTCGCGCATTTAGCTAAACAGGCTGGAATTCCGGACGGAGTTCTTAATGTAGTACCCGGATTTGGCCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAGGTTAGCTTCACCGGTTCAACGGAAGTAGGCCGTGCCATAATGCACGCGGCGGCTAGCAGCAATCTGAAACCGGTGTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATATTTGATGATGCTGATGTAGATAAAGCTGCTGATCTTGCTCTCTTGGGAATCTTGTTTAATAAGGGAGAAATTTGTGTTGCAAGTTCAAGGGTGTTTGTTCAGGAAGGGATATATGATGAGTTTGAGAAGAAGTTGGTTAAGAAAGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTCAATCTCAGCAAGGCCCTCAGGTTGACAAGAACCAATTTGAGAAAATCCTTTCATATATAGAGATTGGAAAGGAAGAAGGAGCAACCCTACTAACAGGTGGTAAAAAAGTGGGCAACAAGGGCTACTACATTGAACCTACAATCTTCTCTAATGTCAAGGAAAACATGCGCATAGCACAGGATGAAATATTTGGCCCTGTCTTGGCACTGATGAAGTTCAGGACGATTGAGGAAGGAATTAAGAGTGCTAACAACAGTAGATATGGTCTAGCAGCAGGAATAGTGACGAAGAACATAGACACAGCAAACACAGTGTCAAGAGCCATTCGTGCAGGCATTATTTGGATCAATTGCTACTTTGCTTTTGGGAATGACATTCCTTATGGAGGGTATAAGCAGAGTGGGTTTGGAAGAGATTTTGGAATGGAGGGTCTACATAAGTACCTACAAGTTAAATCTGTTGTCACTCCCATATACAATTCTCCTTGGCTTTGA 1518 0.444 MTALSNGHAANNSSPLFKIPPIKFTNLFINGHFVHSLSGNEFETIDPRTGEVIAKISEGRKEDIDVAVKAAREAFDNGPWPRMSGAERAKIMMKWADLIEENVEELAALDAIDAGKLYHLVKVLDIPAVANCLRYYAGAADKIHGEVLKGARELHAYTLMEPIGVVGHIIPWNFPSTMFAAKVSPSLAAGCTVVLKPAEQTPLSALFFAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGRAIMHAAASSNLKPVSLELGGKSPLLIFDDADVDKAADLALLGILFNKGEICVASSRVFVQEGIYDEFEKKLVKKAKAWVVGDPFDPQSQQGPQVDKNQFEKILSYIEIGKEEGATLLTGGKKVGNKGYYIEPTIFSNVKENMRIAQDEIFGPVLALMKFRTIEEGIKSANNSRYGLAAGIVTKNIDTANTVSRAIRAGIIWINCYFAFGNDIPYGGYKQSGFGRDFGMEGLHKYLQVKSVVTPIYNSPWL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3927 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 275 464 IPR016163 GO:0016620
Amo05g3927 505 SUPERFAMILY ALDH-like 18 501 IPR016161 GO:0016491
Amo05g3927 505 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 5 505 - -
Amo05g3927 505 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 505 - -
Amo05g3927 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 493 IPR016162 GO:0016491
Amo05g3927 505 Pfam Aldehyde dehydrogenase family 38 495 IPR015590 GO:0016491
Amo05g3927 505 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 299 310 IPR016160 GO:0016491
Amo05g3927 505 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 271 278 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3927 Amo-Chr5 106130269 106140783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3927 4 505 Aldehyde Dehydrogenase Gene Family AT3G24503 71.372 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3927 K12355 - gmx:100783920 848.966