Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3923 ATGGAACCTGTTGGTGTTGTGGGACACATTATCCCTTGGAATTTTCCTACTGTCATGTTCTTCACCAAGGCTAGCCCTGCCTTAGCCGCCGGCTGCACCATGCTCCTCAAGCCGGCCGAGGATACGCCTCTCTCGGCTCTCTTTTATGCTCATCTTGCTAAGCTGGCTGGTATCCCAGATGGGGTGCTAAATGTTGTACCTGGATTTGGTTCTACTGCTGGAGCTGCAATAGCCTCACATATGGACGTGGATGCGGTCAGTTTTACTGGTTCGACGGAGACTGGCCGGAAGGTAATGATGGCGGCAACCATGAGCAATTTGAAACCAGTTTCACTTGAATTAGGTGGCAAATCCCCAGTCTTGATCTTTGATGATGCTGATGTTGACAAAGCTGTTGACCTTGCTCTCTTCGGTATCCTACATAACAAGGGAGAAATATGTGTTGCATTTTCCAGAGTTTATGTTCAAGAAAGAATTTATGATGAATTTGAGAAAAAAGTTGTGGAGAAGGCAAAAACATGGGTAGTAGGGGATCCATTTGACCCTAAAGTTCAGCAAGGACCACAGACTAGTAAGGCACAATTTGAGAAAATCCTGTCCTATATTGAGCTTGGAAAGAAAGAAGGAGCTACCCTTTTAACTGGGGGAAAAAGATTTGGAAACAAGGGCTACTACATTGAGCCTACAATTTTCTCCAATGTTAAGGAGGACATGCTAATATCACAAGATGAGATATTTGGACCTGTCATGGTGCTTTCTAAGTTCAAGAGCATTGGGGAAGGAATTGAAAAGGCAAATAGCAGCAAATATGGACTAGCGTCGGGGATTGTGACGAAGAACATGGATATTGCAAACACAGTGTCAAGGTCCATCCGAGCAGGCATTGTTTGGATCAACTGCTTCTTTGCCTTTGATGTTGATTGCCCTTTTGGAGGCTACAAGATGAGTGGATTTGGAAGAGATTATGGATTGGAAGCACTCCATAAGTACCTTCAAGTTAAATCTGTTGCAACTCCTATTTATAATTCTCCTTGGCTTTGA 1041 0.44 MEPVGVVGHIIPWNFPTVMFFTKASPALAAGCTMLLKPAEDTPLSALFYAHLAKLAGIPDGVLNVVPGFGSTAGAAIASHMDVDAVSFTGSTETGRKVMMAATMSNLKPVSLELGGKSPVLIFDDADVDKAVDLALFGILHNKGEICVAFSRVYVQERIYDEFEKKVVEKAKTWVVGDPFDPKVQQGPQTSKAQFEKILSYIELGKKEGATLLTGGKRFGNKGYYIEPTIFSNVKEDMLISQDEIFGPVMVLSKFKSIGEGIEKANSSKYGLASGIVTKNMDIANTVSRSIRAGIVWINCFFAFDVDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYNSPWL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3923 346 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 1 346 - -
Amo05g3923 346 Pfam Aldehyde dehydrogenase family 2 336 IPR015590 GO:0016491
Amo05g3923 346 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 140 151 IPR016160 GO:0016491
Amo05g3923 346 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 336 IPR016162 GO:0016491
Amo05g3923 346 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 112 119 IPR029510 GO:0016491
Amo05g3923 346 SUPERFAMILY ALDH-like 2 342 IPR016161 GO:0016491
Amo05g3923 346 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 346 - -
Amo05g3923 346 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 118 307 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3923 Amo-Chr5 106043837 106047345 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3923 2 346 Aldehyde Dehydrogenase Gene Family AT3G24503 71.304 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3923 K12355 - gmx:100784449 628.246