Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3874 ATGGACTGCAAGAATTTTGAGGGAAGCGAAGAGAGACAGGCCTTGTTTCATGGAGATCAAAATAACATGACATATATTCAGCAGGCAGCAAATGCTGCAATAACTGGAGCAATTGGTACATCTGGTTATTCATCGCCTCCGGTATCCAAGAAAAGAAAAGGCCAGGAAATCTTCGTTGGGCAAACACCCAAGGAACCATCCGTTAGCAAGTTGGGACAACAGGTAAACCATGTCCGAAGTCCAGCTCCATCCCCATCCTTGCCCTCCCTTCCGGGCACTCGTGTTGGAACTGCAACACTTGGTCCTTCAAAATTTTCATACAGGTCTCTTTTAGCAGATATCATACAACCACAGCACTTGAAAGAGCTTTGCTCAGTTTTGGTGCTGCTATCTGGACAAGCTGCAAAGACACTTACAGACCAGAAAAATTTAATGGAAAAGCATACAGAAGATCAGACAGAAACTTCACTTGCTTCTTCAAATCAGTCACAATTACCAAATCAAAAGGAAGGTGATGTTGAGAAAGCTATGGCTGATGATTGTTCGAGCGCAAACCAAGCAGATAAAATCAGCCCGGACAATTCAAGTTCAGATGGTGCTGACGTCCCGAAAGGGAGGCCAATGTCTCCTGGGACTTTAGCTTTGATGTGTGACGAGCAAGATACGTTCATGACAGCTGCCTCTCCAGTTGGCACAATGGCTCATGGCTGCAACACATCCTCGGAATTTCCTTACGGACAAGGAATGACAGAGGAATACGCGGAGCAAGAAAGGATTGTCTTAACAAAGTTTAGAGATTTCCTTAACAGAGTTATCACCATGGGAGAAATAAATGAAACAAAGTGTTCGTCGTTAGCTAGAAGTGAGTTGGAGAGCCAGAAGGATCCAATCAATAACGGCACTGGAAATACGACTACCGAGAGTTTGCATCAGCAGGGTGCCACTAGCAATGGTGTTGCCAAATCGATTGTTCCACCTACGGCTGCAGCAGCTTCGGCTTCACCAGTCCCCGGTCATAATAATGTTCCTGAAAATGGAGAAAATAAGATGAAGACTGAAAAATAG 1065 0.4479 MDCKNFEGSEERQALFHGDQNNMTYIQQAANAAITGAIGTSGYSSPPVSKKRKGQEIFVGQTPKEPSVSKLGQQVNHVRSPAPSPSLPSLPGTRVGTATLGPSKFSYRSLLADIIQPQHLKELCSVLVLLSGQAAKTLTDQKNLMEKHTEDQTETSLASSNQSQLPNQKEGDVEKAMADDCSSANQADKISPDNSSSDGADVPKGRPMSPGTLALMCDEQDTFMTAASPVGTMAHGCNTSSEFPYGQGMTEEYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKDPINNGTGNTTTESLHQQGATSNGVAKSIVPPTAAAASASPVPGHNNVPENGENKMKTEK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3874 354 MobiDBLite consensus disorder prediction 184 198 - -
Amo05g3874 354 MobiDBLite consensus disorder prediction 154 169 - -
Amo05g3874 354 MobiDBLite consensus disorder prediction 145 211 - -
Amo05g3874 354 PANTHER TESMIN/TSO1-RELATED 1 333 IPR028307 -
Amo05g3874 354 MobiDBLite consensus disorder prediction 287 322 - -
Amo05g3874 354 MobiDBLite consensus disorder prediction 287 354 - -
Amo05g3874 354 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3874 Amo-Chr5 105185295 105188791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3874 1 307 CPP Transcription Factor Family AT4G29000 52.761 9.06e-95 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3874 - - lja:Lj2g3v0796780.1 548.125