Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3863 ATGGACACTCATCCACCATCGGAGAAGAGCTGGACCATCCACACCCGACCAGAAATAACCGCCAAATACCAAATTCTGGATCGGGTTGGGTCGGCCGCATATGCTGACGTGTACCGTGGACGGCGTCTATCCGACGACGTAACGGTGGCGCTGAAGGAGGTCCACGACGCTCGGTCGGCGCTCAGGGAAATCGAAGCTCTAAGAGTCCTTCAGGGCTCTCAAAACGTCGTCGTCATGCACGAGTTCTTCTGGAACGACGATGATGAAGATGCCGTGATCGTGCTCGAGTTTTTCAGGACAGACCTCGCTGCCGTGATCGCGGAAGCTGCTGCTGCTGCTGGTGGCCGTGGTTTTGATGTCGGTGAGGTGAAGAGGTGGATGATGCAGGTGCTTAGTGGTGTGGATGCTTGCCATAGGAACATGATCGTCCATAGAGACTTGAAGCCTTCCAATTTCTTGGTTTCAGATCATGGAGTGCTCAAATTGGCCCATTTCGGACAGGCAAGGATAATTATGGAGCCTGGATTTGACTCTACAGAGGAGAACCCACCACCACCATATGAGCATGATTATACTTCTTCAGTTCCGGAGAGCTCATCAATTGAACATCCTTCATCATCAGAGGCTTTTCCTCATGACCAAGGGACCATAAATCATGAAGAGTATTTCAGAGTTCTAGAAGAAATGAAAACCAAGAATACCATATATGACACTGATAAGGACCCAAACATCCAAGATGGAAACACCTCTTGTCTTGCAACTTGCACAACAAGTAACACTGATGATGGCGATGATGATCTCTGGAAGGCTTCGTTGACATTTGAAGCAGCGGAGGAGGAAGAAAGGAGGAATGAACTCGACTGTTGCCTCACACCACGTGTTGGAACTCGGTGGTATAAGGCTCCTGAATTGCTCTATGGATCCACAGATTATGGTTTAGAGGTTGATCTATGGTCTTTAGGGTGTATATTTGCGGAATTGCTAACGTTGAAGCCTTTGTTTCCTGGAACATCTGATATAGATCAATTGAGTAGGATCGTTAGTGTTTTGGGAAACATTGATGGAGAATCTTGGCCTGGTTGTTCTAAGCTTCCTGATCATGCAACAATGTCGTTTGGTAATGTGGAGAGGCCTATTGGTTTTGAAGAGTGCATGAAGAATTGCGGAAAGGATCAAGTGTCTATGATAAAGAAACTTGTTTGTTATGATCCAGCTAGGAGGGCCACAACAATGGAGATGCTTCATGATAAGTTCTTTAGTGAAGAGCCTTGA 1272 0.4693 MDTHPPSEKSWTIHTRPEITAKYQILDRVGSAAYADVYRGRRLSDDVTVALKEVHDARSALREIEALRVLQGSQNVVVMHEFFWNDDDEDAVIVLEFFRTDLAAVIAEAAAAAGGRGFDVGEVKRWMMQVLSGVDACHRNMIVHRDLKPSNFLVSDHGVLKLAHFGQARIIMEPGFDSTEENPPPPYEHDYTSSVPESSSIEHPSSSEAFPHDQGTINHEEYFRVLEEMKTKNTIYDTDKDPNIQDGNTSCLATCTTSNTDDGDDDLWKASLTFEAAEEEERRNELDCCLTPRVGTRWYKAPELLYGSTDYGLEVDLWSLGCIFAELLTLKPLFPGTSDIDQLSRIVSVLGNIDGESWPGCSKLPDHATMSFGNVERPIGFEECMKNCGKDQVSMIKKLVCYDPARRATTMEMLHDKFFSEEP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3863 423 PANTHER CELL DIVISION PROTEIN KINASE 20 421 - -
Amo05g3863 423 ProSiteProfiles Protein kinase domain profile. 23 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3863 423 Gene3D Transferase(Phosphotransferase) domain 1 112 204 - -
Amo05g3863 423 Gene3D Phosphorylase Kinase; domain 1 14 111 - -
Amo05g3863 423 Gene3D Transferase(Phosphotransferase) domain 1 210 423 - -
Amo05g3863 423 SUPERFAMILY Protein kinase-like (PK-like) 9 421 IPR011009 -
Amo05g3863 423 Pfam Protein kinase domain 281 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3863 423 Pfam Protein kinase domain 23 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3863 423 PANTHER CYCLIN-DEPENDENT KINASE 10 20 421 - -
Amo05g3863 423 MobiDBLite consensus disorder prediction 175 214 - -
Amo05g3863 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Amo05g3863 423 SMART serkin_6 23 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3863 423 MobiDBLite consensus disorder prediction 192 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3863 Amo-Chr5 105064176 105066759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3863 1 423 Core Cell Cycle Gene Families AT4G28980 57.077 1.79e-171 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Amo05g3863 Pkinase 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3863 - - adu:107490287 834.713