Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3843 ATGGGCTGCATCTACTCTCGTGTTTGCATCGGCGACAACTGCGTCGGAGGTGCCGCCGCCGCCTCCAGCATCAACGGCGACGCAATCGCTCGTCCTCCGCGCGGGACCTCATCCTCCGAGCCAGACGAATCCTCCGCCGCCGCCGCCGCCTCGCCGGACGGCGACTTCCAGGTGCTGAATCAGCTCAGCTTGACGCGGGACCCGGAGGCCGGAATCCGGAGGCTCGCTAGGGTTTCGTCACAGTTCCTTCCACCGGAAGGTTGTAAAGTGGCGAAGGTTCCTGCGTTCAGCTACGAGCTTCGCTACTCGTTCTTGTCACAGAGAGGTTACTATCCTGACGCACTGGACAAGGCGAACCAGGACAGCTTCTGTATCCACACACCGTTTGGTTCGAGTCCGAATGACCATTTCTTCGGTGTCTTCGACGGCCACGGCGAGTTCGGTGCGCAGTGTTCACAGTTTGTCAAGCAGAAGCTCTGTGAGAATCTTCTTCGAAGTGCGAAATTCCAAAACGATGCCGTTGAGGCTTGTCACGGTGCTTTTCTGGCCACGAATTTGCAGCTTCACAATGATGTCTTGGATGACAGCATGAGCGGGACGACGGCGATCACGGTGCTGGTGAGAGGGAGAACTATAATTGTGGCGAATTCAGGCGATTCGAGGGCGGTGATTGGAGAGAGGAGAGGGAAGGATCTTGTGGCCGTTGATTTGTCGTTGGATCAGACTCCGTTTAGGGCTGATGAGCTGGAGAGAGTGAAGATGTGTGGTGCCAGGGTTTTGACTTTGGATCAAATTGAGGGTTTGAAGGATCCTGAAGTTCAGTGTTGGGGAAATGAAGAAGGTGATGATGATGGGGACCCACCTAGGTTGTGGGTCCCAAATGGGATGTACCCTGGGACTGCATTCACAAGGAGCATTGGGGATTCAATTGCCGAGACTATTGGTGTTGTTGCTAACCCTGAGATTGTTGTCTTTGAGCTCACCAAGGATCATCCTTTCTTCGTGCTTGCAAGTGATGGTGTCTTTGAATTCATCTCTAGCCAAACGGTAGTTGATATGGTTGCAAAGTTCAAAGATCCACGTGATGCTTGTGCTGCAATAGTAGCTGAATCTTATCGGCTTTGGCTACAGTATGAAACTCGTACGGATGATATCACAATCATCATTGTGCATATAAATGGGCTAACTGAACCTGGTGTTGGTCAGGAAAAAACATTTGGCGAATCTTTACGAACTCCAGTGCCTCAAGTTGTAGAGATGACAGGTTCAGAATCTCCCTCTACCCTGGGTTGGAACTCTAGGAACCAACGGGTAAGGCATGACTTGTCAAGGGCACGCCTCCGAGCAATTGAAAATTCCCTGGAGAATGGGCAAGCTTGGGTTGCTCCATCTTCAGCGCATAGGAAGACATGGGAGGAAGAAGCACAGATAGAGCGAGCACTGCATGATCATTTTCTCTTCCGAAAACTTACTGCTTCTCAATGTAATGTTCTATTGGATTCCATGGAAAGAGTTGAGGTGCAACCTGGTGATATTATAGTCAAACAGGGCAGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAAGTCTTGGCAACTCAGGAAGAAAAAGATGGGGAAGTAACCAAGGTTTTACAGCGTTACACATCGGAAAAACTATCATGCTTTGGAGAGCTTGCTCTAATGTACAATAAACCACTCCAGGCTTCTGTACGTGCTGTAACTAAAGGGACTCTTTGGGCTTTAAGGCGAGAAGATTTTCGAGGCATTCTAATGTCAGAATTCTCGAATTTGTCATCCTTGAAGTTGCTACGATCTGTAGATCTCCTGTCAAGATTGTCAATTTTACAACTGAGTCAGATTTCTGACTCCCTCTCTGAAGTCTCCTACGCAAGTGGGCAGACAATAATTGATCGTAGTGAAGTCCATGGATTGTACATAATCCAGAAGGGACAAGTGAAAATCACTTTTGATGCGGATTTATTGATGAATCCAAATGTTTGCAGCCTTGAGCCTGATTTGGAAAATGTGAATGATAATGCACAGAGCAGAATAGAATTGTCAATAGAGAAGCAAGAGGGAAGCTATTTTGGTGAATGGGCCCTTCTTGGTGAAAAAGTTGGTCCCTTAAGTGCTGTTGCTGTGGGTGATGTTGTATGTGTTGTATTAACAAAAGAGAAATTTGAATCTGTTGTTGGCTCCATACAAAAGATTTCTCAGGAGGATCGCAAGTCAAGACATAATTCCAAAGAGTTGGCTAGAAATTTTGACTTTTCATTTGTAGGAAAAGTCCAGCTCTCAGATTTGGAATGGATAAAGAGTGTCTATTCTACTGACTGCTCTGATATTGGGCTTGTAAAGTTTGGAGAAGCAGAAAATTTGCTTACATTGAAGAGATTTTCCAAGCCAAAAGTGAAAAGGCTGGGAAAAGAAGCACAAGTCTTGAAAGAGAAAGATATGATGAAGGGTGTGAGCTCTTCAGCATGTATACCACAGGTTTTATGCACTTCTGCCGACAGCATATATGCTGGAATAGTGTTAAATACACTCCTTGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTGGTGAAACGGCCGCACAGTTTTGTGCTGCATCTGTTGTTATTGCTTTAGAAGATTTGCACAAGAATGGTGTTCTCTACAGAGGAGTCTCGCCTGATGTTGTGATGTTGGACCAAACAGGACATATACAGCTGGTTGACTTTAGATTTGGTAAGAAGCTTGCCGGTGAAAGAACATTCACAATTTGTGGGATGGCAGATTCACTAGCTCCAGAGATTGTGTTGGGAAAAGGCCACAGTTTCCCTGCTGACTGGTGGGCATTGGGAGTTCTGATATATTTTATGCTACGAGGTGAAATGCCATTTGGATCATGGAGGGAAAATGAACTTGATACAGTTGCCAAAATTGCGAAGCGGAAGCTACATCTTCCAGATACATTCAACCCCGACGCTGTTGATATCATATCCAAGTTACTTGATGTGGAAGAAACTACTAGACTTGGTAGCCAAGGTACTGATTCTGTCAAGAGTCACCCATGGTTTAATGGTGTTGAATGGGAAGGGATTCGCCACCGCACTTTCCCCGCTCCTCCAGAAATCATTTCTCGTGTTGCACAATACTTGGAAGTTCATTCTGAGGATTGCAGTGGTTCTCTAGGTTCCCCATTACAGGAGGTAGAAGAACTCAATGTGCCTGAATGGCTTGAGGACTGGTAA 3252 0.4628 MGCIYSRVCIGDNCVGGAAAASSINGDAIARPPRGTSSSEPDESSAAAAASPDGDFQVLNQLSLTRDPEAGIRRLARVSSQFLPPEGCKVAKVPAFSYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGSSPNDHFFGVFDGHGEFGAQCSQFVKQKLCENLLRSAKFQNDAVEACHGAFLATNLQLHNDVLDDSMSGTTAITVLVRGRTIIVANSGDSRAVIGERRGKDLVAVDLSLDQTPFRADELERVKMCGARVLTLDQIEGLKDPEVQCWGNEEGDDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTKDHPFFVLASDGVFEFISSQTVVDMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIIVHINGLTEPGVGQEKTFGESLRTPVPQVVEMTGSESPSTLGWNSRNQRVRHDLSRARLRAIENSLENGQAWVAPSSAHRKTWEEEAQIERALHDHFLFRKLTASQCNVLLDSMERVEVQPGDIIVKQGSEGDCFYVVGSGEFEVLATQEEKDGEVTKVLQRYTSEKLSCFGELALMYNKPLQASVRAVTKGTLWALRREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVSYASGQTIIDRSEVHGLYIIQKGQVKITFDADLLMNPNVCSLEPDLENVNDNAQSRIELSIEKQEGSYFGEWALLGEKVGPLSAVAVGDVVCVVLTKEKFESVVGSIQKISQEDRKSRHNSKELARNFDFSFVGKVQLSDLEWIKSVYSTDCSDIGLVKFGEAENLLTLKRFSKPKVKRLGKEAQVLKEKDMMKGVSSSACIPQVLCTSADSIYAGIVLNTLLACPLSSILSSPFGETAAQFCAASVVIALEDLHKNGVLYRGVSPDVVMLDQTGHIQLVDFRFGKKLAGERTFTICGMADSLAPEIVLGKGHSFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLHLPDTFNPDAVDIISKLLDVEETTRLGSQGTDSVKSHPWFNGVEWEGIRHRTFPAPPEIISRVAQYLEVHSEDCSGSLGSPLQEVEELNVPEWLEDW* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3843 1083 ProSiteProfiles PPM-type phosphatase domain profile. 101 392 IPR001932 -
Amo05g3843 1083 ProSiteProfiles cAMP/cGMP binding motif profile. 612 736 IPR000595 -
Amo05g3843 1083 Gene3D Jelly Rolls 458 600 IPR014710 -
Amo05g3843 1083 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Amo05g3843 1083 ProSiteProfiles Protein kinase domain profile. 775 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3843 1083 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 42 1083 - -
Amo05g3843 1083 CDD CAP_ED 612 715 IPR000595 -
Amo05g3843 1083 MobiDBLite consensus disorder prediction 26 51 - -
Amo05g3843 1083 Gene3D - 96 393 IPR036457 -
Amo05g3843 1083 PRINTS cAMP-dependent protein kinase signature 522 536 - -
Amo05g3843 1083 PRINTS cAMP-dependent protein kinase signature 507 521 - -
Amo05g3843 1083 PRINTS cAMP-dependent protein kinase signature 731 743 - -
Amo05g3843 1083 PRINTS cAMP-dependent protein kinase signature 557 566 - -
Amo05g3843 1083 Pfam Cyclic nucleotide-binding domain 631 735 IPR000595 -
Amo05g3843 1083 Pfam Cyclic nucleotide-binding domain 505 596 IPR000595 -
Amo05g3843 1083 SMART serkin_6 707 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3843 1083 SUPERFAMILY Protein kinase-like (PK-like) 794 1053 IPR011009 -
Amo05g3843 1083 SUPERFAMILY cAMP-binding domain-like 604 739 IPR018490 -
Amo05g3843 1083 SUPERFAMILY cAMP-binding domain-like 451 596 IPR018490 -
Amo05g3843 1083 SMART cnmp_10 612 750 IPR000595 -
Amo05g3843 1083 SMART cnmp_10 486 609 IPR000595 -
Amo05g3843 1083 SMART PP2C_4 102 390 IPR001932 -
Amo05g3843 1083 Pfam Protein kinase domain 795 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3843 1083 Gene3D Jelly Rolls 601 755 IPR014710 -
Amo05g3843 1083 Gene3D Phosphorylase Kinase; domain 1 770 856 - -
Amo05g3843 1083 ProSiteProfiles cAMP/cGMP binding motif profile. 486 595 IPR000595 -
Amo05g3843 1083 SUPERFAMILY PP2C-like 86 394 IPR036457 -
Amo05g3843 1083 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 42 1083 - -
Amo05g3843 1083 CDD CAP_ED 486 595 IPR000595 -
Amo05g3843 1083 CDD PP2Cc 117 392 IPR001932 -
Amo05g3843 1083 Gene3D Transferase(Phosphotransferase) domain 1 857 1042 - -
Amo05g3843 1083 Pfam Protein phosphatase 2C 127 371 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3843 Amo-Chr5 104718171 104727104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3843 1 1083 PP2C-type Phosphatase Gene Family AT2G20050 66.878 0.0 1452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Amo05g3843 PP2C 2.5e-34 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3843 - - adu:107490298 2080.06