Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3808 ATTAAAGCAGTTAAACAAGCCCAAAACAAGCATGGCCGCGGCCACGTCAAATTCATCCGCTGTTCCAACTGCGGCAAGTGCTGCCCTAAGGACAAATCGATCAAGCGGTTCCTTGTGAGGAACATTGTTGAGCAAGCTGCAGTTCGTGATGTTCAGGAAGCCTGCGTCTATGAGCAATACACTCTTCCGAAGTTGTACGTGAAGATGCAGTATTGTGTTTCCTGTGCCATCCACTCTCATGTCGTGAGGGTGCGTTCTCGCACCGATAGGAGGAACCGCGAGCCGCCACAGCGCTTTGCCAGGCGCAGGGATGATGCACCAAGGCCCGGTCAGCCTGGTCAAGCACCTCGTCCTGCTGGTGGAGTAGGAGCTGCCCCTCGAACTTAA 387 0.5426 IKAVKQAQNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPAGGVGAAPRT* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3808 128 Gene3D Ribosomal protein S26e 1 112 IPR038551 -
Amo05g3808 128 MobiDBLite consensus disorder prediction 83 128 - -
Amo05g3808 128 PANTHER 40S RIBOSOMAL PROTEIN S26 5 127 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo05g3808 128 Pfam Ribosomal protein S26e 6 104 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo05g3808 128 ProSitePatterns Ribosomal protein S26e signature. 71 78 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo05g3808 128 MobiDBLite consensus disorder prediction 87 108 - -
Amo05g3808 128 PANTHER 40S RIBOSOMAL PROTEIN S26 5 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3808 Amo-Chr5 104051985 104053494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3808 7 114 Cytoplasmic Ribosomal Protein Gene Family AT2G40510 81.481 3.24e-62 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3808 K02976 - gmx:100808790 181.03