Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3763 ATGAAGGAAGTTAGACTTTCATGTTTCACTCTTGTGGCGTTGATCATCATGTTCTTGAACCATGCAAACTCTGAGTCTCAGCTTCTTCATGATCAAGAACATCAAGTTCTAATGAGGATCAAGCATTACCTTCAAGACCCTTCTTTTCTCCGTCACTGGACCCCATCAAACTCCTCTCATTGTTCTTGGCCTGAGATTTCTTGCACCAACGGTTCTGTCACAGGAATAACTTTGGTTAATCTTAACATCAATCAAACAGTGCCCCCTTTCATTTGCGATCTCAAGAACCTCACACTTGTTGATTTCAGCAACAACTCAATTCCTGGGGTGTTCCCAAATTATCTCTACAATTGCTCCAAGCTTGAGTATCTTAATCTTTCTATGAACTACTATGTTGGTGAAATACCTCATGATATTGATACTTTGTCCAATTTGAAGTACCTTAACCTTAGTTATTCCAATTTCACCGGTGACATTCCTTCCAGTGTTGGAAATTTGAAGGAACTAAGGTTCCTTGCACTGCAAGATTGTCTATTCAATGGTACTCTCCCTGACGAGATTGGAAACTTGTCTAATCTCGAAACGTTGGATTTGTCCAGTAACGAATTGCTTCCGCCTTCGAGGTTGCCGTTGAGCTGGACCAAGTTGAATAAGCTGAAAGTGTTTTACATGTTTGAGTGCAACCTGTTTGATGAAATTCCTGAGAGAATTGGAGAAATGGTTGCATTGGAGAAGCTGGATTTGTCGCAGAACGAATTAACCGGAGAAATTCCAAGCAGTTTGTTCTTGCTGAAGAATCTGAATGTTGTGTACCTTTGGAAAAACAAGCTTTCTGGGGAGATACCATCCAAGATTGAAGCATTGAATCTGACCAACATTTCGTTATCAAATAATATGCTTACAGGGAAAATACCAGAAGATTTTGGAAAACTCCAAATGCTAATGGAATTCAAATTGAGCATGAATAACTTGTCAGGGGAGATACCACAAAGCATAGGGAGTCTTCCATCTCTAGTCGATTTTCGTGTCTTCATGAACAATCTATCAGGTACTATTCCTCCCCAATTTGGCCGCAACTCCAAGCTTCAATCCTTTCAAATTTCATCCAACAATTTTATTGGAATGCTTCCAGAGAATTTATGCTATTATGGTGAATTGCTTACATTAACTGTTTATGAAAATAGCTTGAATGGTGAGCTGCCAGAGTCACTAGGAAATTGTAGTACCCTTCAGAACCTGAAAATTTGGAGCAATGAATTTTCTGGTAACATTCCTAGTGGCCTTTGGAAATCTCCCAATTTGGTGAATTTCATAGTAAACCATAATAGGTTCACTGGTGGAATCCCTGAGGAATTGTCACCGAGCATTTCGCTCTTCGACATAAGTTACAATCAGTTTTCTGGTAGAATTCCGACTGGCGTGTCATCTTGGACTAATGTGGTAGAGTTTATTGCAAGTAAGAACTATTTGAATGGAACTATTCCTCATGAGTTAACAGAACTTCCCAAGTTATCAAAACTCTTGCTTGATCAGAACAACCTCACTGGGCCAATTCCTTCAGATATAGCCTCGTGGAACTCTCTAGTTACTCTAAATTTGCGCCATAATCACTTGTATGGACAAATCCCAGATTCAATTGATCCATTACCTGCACTTCTAGAACTTGACCTCTCAGAGAATCAATTCTCTGGCCATGTTCCTTCTCTGTCTTCAAGACTCACCAATCTCAATCTATCATCCAATCATCTGACTGGGAAAGTTCCAAGTGAATTTCAGAATTCTGCATTCGACACAAGCTTTTTGGACAATCCTGGCCTTTGCGCTGATACACCGGTGCTGAACATTACATTGTGCAATTCTGGCTCACAAAATTCAAGCAAGGACTCATCATCTTGGTCCCTTGCCTTGATCATAGGCCTTGTTTTAGCAGTCTCATTACTCGCTATTGTGGCGTTATTCTTGGTTATCAGATTCATCAGGAAAAGGAAGAAAGTGGATAACTCATGGAAGCTCACTTCATTCCAAAGGCTGAGCTTCACTGAATCAGATATAGTTTCTTCAATGACAGAACATAATATCATTGGCAGTGGAGGATATGGTACAGTGTACCGTGTCAATGTCAATGGTTTAGGCTTTGTCGCTGTCAAAAAGATTTCTGGTAACAGAAAGCCAGACCAGAAGCTTGAGAATTCGTTTCTCTCTGAAGTTAAGATATTAAGCAGCATTCGACATAGGAACATTGTGAAATTGTTATGCTGCATCCACAATGATGTTTCTAGGCTTCTTGTTTATGAGTATATGGAGCATAGAAGCCTTGACAAATGGCTGCACAAGAAGATCAAGCCATCATCATTATCTATTTCAGGTTCAGTCCAACATCATCAGGTTGCACTGAATTGGCCCAAGAGAATACAAATAGCCATTGGTGTTGCACAAGGATTGAGCTACATGCACCATGATTGCTCCCCGCCCATTGTTCATCGCGACGTGAAAACAAGCAACATACTTTTGGATTATCAATTCAATGCAAAAGTTGCTGATTTTGGCCTAGCAAGGATGTTGATCAAGCCAGGGGAACTTGCCACCATGTCAACTGTTGTTGGATCATTTGGATATCTTGCTCCAGAATACATTCAGACCACAAAAGTCAGTGAAAAGATTGATGTTTTTAGCTTTGGGGTGATCCTATTGGAGCTGACAACAGGTAAAGAAGCTAACTATGGAGATGAGCACTCATCTCTTGCAGAATGGGCATGGAAACACATTCAGTTAGGAAGCAACATTGAAGAGCTACTTGATAAAGAAGTCATGGAACCTATTTACATGGATGAGATGTGTCATGTTTTCAAACTTGGTGGGATGTGCACTTCAAAGCTTCCTGATTCTAGACCTACCATGAAGGAGGCATTGCAATTATTGCTACAAAGTGGTGAATCATATTCTTTTGGCGAGAGGAATAGTGTTGGACAGTGTGATGCTGTTCCTCTTCTTAGAAATTCAAAACGTGAGCATAAATTGGATATTGATGGTGACAAACTAGCTTGA 3045 0.402 MKEVRLSCFTLVALIIMFLNHANSESQLLHDQEHQVLMRIKHYLQDPSFLRHWTPSNSSHCSWPEISCTNGSVTGITLVNLNINQTVPPFICDLKNLTLVDFSNNSIPGVFPNYLYNCSKLEYLNLSMNYYVGEIPHDIDTLSNLKYLNLSYSNFTGDIPSSVGNLKELRFLALQDCLFNGTLPDEIGNLSNLETLDLSSNELLPPSRLPLSWTKLNKLKVFYMFECNLFDEIPERIGEMVALEKLDLSQNELTGEIPSSLFLLKNLNVVYLWKNKLSGEIPSKIEALNLTNISLSNNMLTGKIPEDFGKLQMLMEFKLSMNNLSGEIPQSIGSLPSLVDFRVFMNNLSGTIPPQFGRNSKLQSFQISSNNFIGMLPENLCYYGELLTLTVYENSLNGELPESLGNCSTLQNLKIWSNEFSGNIPSGLWKSPNLVNFIVNHNRFTGGIPEELSPSISLFDISYNQFSGRIPTGVSSWTNVVEFIASKNYLNGTIPHELTELPKLSKLLLDQNNLTGPIPSDIASWNSLVTLNLRHNHLYGQIPDSIDPLPALLELDLSENQFSGHVPSLSSRLTNLNLSSNHLTGKVPSEFQNSAFDTSFLDNPGLCADTPVLNITLCNSGSQNSSKDSSSWSLALIIGLVLAVSLLAIVALFLVIRFIRKRKKVDNSWKLTSFQRLSFTESDIVSSMTEHNIIGSGGYGTVYRVNVNGLGFVAVKKISGNRKPDQKLENSFLSEVKILSSIRHRNIVKLLCCIHNDVSRLLVYEYMEHRSLDKWLHKKIKPSSLSISGSVQHHQVALNWPKRIQIAIGVAQGLSYMHHDCSPPIVHRDVKTSNILLDYQFNAKVADFGLARMLIKPGELATMSTVVGSFGYLAPEYIQTTKVSEKIDVFSFGVILLELTTGKEANYGDEHSSLAEWAWKHIQLGSNIEELLDKEVMEPIYMDEMCHVFKLGGMCTSKLPDSRPTMKEALQLLLQSGESYSFGERNSVGQCDAVPLLRNSKREHKLDIDGDKLA* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3763 1014 SUPERFAMILY L domain-like 39 370 - -
Amo05g3763 1014 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 1005 - -
Amo05g3763 1014 Pfam Leucine Rich Repeat 243 261 IPR001611 GO:0005515
Amo05g3763 1014 Pfam Leucine Rich Repeat 572 593 IPR001611 GO:0005515
Amo05g3763 1014 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Amo05g3763 1014 SMART LRR_typ_2 94 118 IPR003591 -
Amo05g3763 1014 SMART LRR_typ_2 190 216 IPR003591 -
Amo05g3763 1014 SMART LRR_typ_2 549 573 IPR003591 -
Amo05g3763 1014 SMART LRR_typ_2 501 525 IPR003591 -
Amo05g3763 1014 SMART LRR_typ_2 240 264 IPR003591 -
Amo05g3763 1014 SMART LRR_typ_2 142 166 IPR003591 -
Amo05g3763 1014 Gene3D Phosphorylase Kinase; domain 1 658 766 - -
Amo05g3763 1014 Gene3D Ribonuclease Inhibitor 208 340 IPR032675 -
Amo05g3763 1014 Gene3D Ribonuclease Inhibitor 341 617 IPR032675 -
Amo05g3763 1014 SUPERFAMILY RNI-like 288 590 - -
Amo05g3763 1014 ProSiteProfiles Protein kinase domain profile. 688 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3763 1014 Gene3D Ribonuclease Inhibitor 141 207 IPR032675 -
Amo05g3763 1014 Gene3D Transferase(Phosphotransferase) domain 1 767 988 - -
Amo05g3763 1014 ProSiteProfiles Leucine-rich repeat profile. 242 264 IPR001611 GO:0005515
Amo05g3763 1014 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Amo05g3763 1014 Gene3D Ribonuclease Inhibitor 31 140 IPR032675 -
Amo05g3763 1014 Pfam Protein kinase domain 690 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3763 1014 SMART serkin_6 688 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3763 1014 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 1005 - -
Amo05g3763 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Amo05g3763 1014 Pfam Leucine rich repeat 502 562 IPR001611 GO:0005515
Amo05g3763 1014 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Amo05g3763 1014 SUPERFAMILY Protein kinase-like (PK-like) 682 973 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3763 Amo-Chr5 103238575 103242075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3763 33 1008 Receptor kinase-like Gene Family AT5G25930 49.395 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo05g3763 Pkinase 6.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3763 - - gmx:100798963 1358.2