Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3723 TCCATTTCTTATGTGCAGATATCTGGCAAGAAAGACCCTCCAATCAGCTCTTCCAAGAATAAGTTAAAAATACTCAGCTGGCAAGAACGACGAAAACTTGAAAGAGATAGAAAGCAGAAAGAAGAGGATGAGCAAATATTAGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTGCTCAAACAAATGGGTTATACGCCCGGTGCTGCCCTAGGCAAAGAGGGTTTGGGTAGGGCTGAGCCAGTGGGGATTGAGATTCGACGATTGCGAGTTGGTATTGGCTTAGATGATCCTCACAAGGAGAAGAGGAAAAATGAGAAAATCATAGCTGAGAGAAAAAGGAGGAAAGAGGAGGATCTAATGCAAGACTTTGGGTTGAGACAGAAGTCGCGATGGCAGAGTAAGAGAGTTGTAGCCAATTTTCATAAGGCAAAGGTTGCCCTTGATCAATTAGAGAATAGAGAAATCATTGAACCGGAAAAGAATGAGGATGATGAAGAAGAGGAAGATGAGGAAGAGGAAGAAATAACAGAAGAGGATTTGCAAGAAGTTTTGATGAAACTGAGGGATGACCACAATTATTGCCTCTTTTGTGGATGCAAGTATGAATCAAAGGATGCTCTCTTTACCAACTGCACTGAAACCAATGAAGATGATCACTAA 675 0.4163 SISYVQISGKKDPPISSSKNKLKILSWQERRKLERDRKQKEEDEQILAKVEAPIPQSNIGFKLLKQMGYTPGAALGKEGLGRAEPVGIEIRRLRVGIGLDDPHKEKRKNEKIIAERKRRKEEDLMQDFGLRQKSRWQSKRVVANFHKAKVALDQLENREIIEPEKNEDDEEEEDEEEEEITEEDLQEVLMKLRDDHNYCLFCGCKYESKDALFTNCTETNEDDH* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3723 224 MobiDBLite consensus disorder prediction 163 183 - -
Amo05g3723 224 Pfam G-patch domain 56 99 IPR000467 GO:0003676
Amo05g3723 224 Coils Coil 166 195 - -
Amo05g3723 224 MobiDBLite consensus disorder prediction 156 183 - -
Amo05g3723 224 MobiDBLite consensus disorder prediction 1 20 - -
Amo05g3723 224 PANTHER UNCHARACTERIZED 10 224 IPR039249 -
Amo05g3723 224 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 10 224 - -
Amo05g3723 224 SMART DUF4187_2 170 224 IPR025239 -
Amo05g3723 224 Pfam Domain of unknown function (DUF4187) 171 224 IPR025239 -
Amo05g3723 224 SMART G-patch_5 54 100 IPR000467 GO:0003676
Amo05g3723 224 ProSiteProfiles G-patch domain profile. 56 102 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3723 Amo-Chr5 102275505 102276704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3723 48 98 C2H2 Transcription Factor Family AT5G26610 43.137 1.36e-06 46.2