Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3712 ATGAAGATTGAGGAATTGGAGGATGGGGAGTGTGTTATGGATGAAAGAGGGAATCACGAGAGGCAGATCGTGAGGGTTGATGCGAAGAGAGCGTTGGTTGGAGCGGGTGCAAGGATCCTGTTTTACCCTACGCTTTTGTACAATGTGCTTCGGAATAAGATTGAAGCTGAGTTCAGGTGGTGGGATGAAGTTGATGAGTTTGTGTTACTGGGCGCTGTTCCATTCCCAAAAGATGTTCCACACTTGAAGAAACTCGGTGTGGGTGGTGTAATTACTCTAAATGAGCCTTATGAAACTTTGGTGCCTTCTAAGTTATATCATACTTATGGGATTGATCATCTGGTAATTCCTACAAGGGATTATCTCTTTGCCCCGTCATTTGGGGATATAAGCAAGGCTGTTCAATTCATTCATCAGAATGCAAGTAGTGGAAGAACTACTTATGTTCACTGTAAAGCTGGGCGAGGGAGGAGTACAACAATTGTTCTTTGTTATTTGGTTGAATACAAGCACATGACACCTGCTGCTGCAATGGAATATGTGCGATCTCGGAGGCCTAGAGTGCTATTGGCACCGTCTCAATGGAAGGCTGTGCAAAAGTATAGCAAGCATAGAGCTTCTTCTTTGCCCTACTCTCCCTCTGCAGATGCAGTTCTTATAACCAAAGACGATCTTGAAGGCTACCATAGCACATGCCATGCTGGTATGGAACTGGCCATTGTACCTAAAGTCACGAAAAAGACCATGCCCATGATAGCAAGATTGTCTTGCCTGTTTACATCGTTGAAAGTTTCRGGTAGCAGTGTACCRACATCCCGGCGGCTGCCAGTATCCGAGGCACTTGCTTGCTAA 852 0.4519 MKIEELEDGECVMDERGNHERQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFVLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSKLYHTYGIDHLVIPTRDYLFAPSFGDISKAVQFIHQNASSGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAAMEYVRSRRPRVLLAPSQWKAVQKYSKHRASSLPYSPSADAVLITKDDLEGYHSTCHAGMELAIVPKVTKKTMPMIARLSCLFTSLKVSGSSVPTSRRLPVSEALAC* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3712 283 Pfam Dual specificity phosphatase, catalytic domain 82 202 IPR000340 GO:0008138|GO:0016311
Amo05g3712 283 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Amo05g3712 283 CDD PTPMT1 60 204 IPR044596 GO:0004721
Amo05g3712 283 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Amo05g3712 283 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Amo05g3712 283 Gene3D Protein tyrosine phosphatase superfamily 60 207 IPR029021 -
Amo05g3712 283 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 203 IPR029021 -
Amo05g3712 283 PANTHER - 2 276 - -
Amo05g3712 283 PANTHER OS01G0739200 PROTEIN 2 276 - -
Amo05g3712 283 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3712 Amo-Chr5 102054769 102057906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3712 4 263 Protein tyrosine phosphatase (PTP) family AT2G35680 53.333 5.97e-102 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3712 - - gmx:100817410 494.197