Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3711 ATGAATAGAGGAGTTGTTCATGGGTCGCCGGTGCAACAAATAATGGCGGCCGGAAACCCTAATTGGTGGAACATCAATAGCATGAGGCCTCCACCTCTTCCACAAGCTCCTCCTTTCTTGTCTACAACTCCTAATTCTTCAAACTTTCTCACCCAATATTCTTCTTCTTCTTCCTCTCTTCCTTTGCCTCCTTCTTGGCATGAAAATCAAGAGCTTCCTGAGTCATGGAGCCAGCTACTCATGGGTGGACTTGTGGGTGAAGAAGATCATCATCAAATGCTAAGTCATCAAGGTGCAAATAACAATGCTTCTCTTGTTGATGTTAAGCAAGAAAGCTCAGTTAACAGCTATGTATATGGCCATGGTGGTGCAAATGAAGAACTTCAGCCATCAAAGACTGCATCTTGGTCTCCAAATTCATGTGTCACAAGCTTCAGCAGCAACATGCTTGATTTTTCAAGCAATAATAATAGTGATCATAAGACTAATATTGATGCAAGGCATCCACCACCACCACCACCAGATCGATCATCTGAGTGTAACAGCAGTGGAAGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCTTCCACAACTACTCAATCCACTTTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCACTTCATCAGCTGGTTTCCCCATTTGGGAAGACTGACACAGCCTCAGTGTTGTTAGAAGCTATCGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGTTTACCATACTTGAGCAATGGATCAGGGAACACAAGGCATCAACAACATTCTGTTCATCAGGGAGAGAAAATTTGTTTATTCCCTGAAGACCCCGGTCAGCTACTGCATGAAAACTGCTTGAAGAGGAAAGCACCTACTAGTGAACAGGATTCTAAAGAAGAGACTAAGAAGGACCTAAGGAGTAGAGGGTTGTGTTTGGTTCCGGTTTCATGCACACTTCAAGTTGGAAGTGACAATGGTGCTGATTATTGGGCTCCAGCACTTGGTGGCGGTTTTCGGTAG 1038 0.4432 MNRGVVHGSPVQQIMAAGNPNWWNINSMRPPPLPQAPPFLSTTPNSSNFLTQYSSSSSSLPLPPSWHENQELPESWSQLLMGGLVGEEDHHQMLSHQGANNNASLVDVKQESSVNSYVYGHGGANEELQPSKTASWSPNSCVTSFSSNMLDFSSNNNSDHKTNIDARHPPPPPPDRSSECNSSGSGGAVKKARVQPSTTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSNGSGNTRHQQHSVHQGEKICLFPEDPGQLLHENCLKRKAPTSEQDSKEETKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3711 345 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 331 - -
Amo05g3711 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 256 IPR036638 GO:0046983
Amo05g3711 345 CDD bHLH_AtbHLH_like 203 252 IPR045239 -
Amo05g3711 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Amo05g3711 345 MobiDBLite consensus disorder prediction 152 204 - -
Amo05g3711 345 Gene3D - 200 257 IPR036638 GO:0046983
Amo05g3711 345 PANTHER OS05G0228400 PROTEIN 17 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3711 Amo-Chr5 102012662 102018026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3711 1 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 46.218 9.15e-68 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3711 - - gmx:100786555 447.973