Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3701 ATGAGTTTACTCACAAACATGGAGCGCATTGAGTCATTATTCAACGCACCAAACACCAAGAAAAAGTGGCACTCTGCTTTCTTAGTCATATATTGTTCTCGAGCCCTCGCGTCACACTTCACTCTCAACAACAAAACCAAACAAAGGAAAATCAATCCTTCTCCATCATTCACCGTCATTGATTTGAATCCGCAACAACCCTTCGCAATTGATCAAACCACCCTAACCACCATCGTCAAAGAAAAAGACCATGCTACCCTCAAGAAACACGGCGGCATTGAAGGCATAGCTAAATCCCTTGAAACCGACATCGAACATGGCATCAAAGGCGATGAAGACATGTCACGCAGACGCCACATATTCGGCTCCAACACTTACCCAAAGCCACGTTCTAAAAGCTTCGTTCATTTCGTATTGGAAGCTTTCAAAGATGTCACCATTCTCATCCTTTTGTGCTGCGCAGCGCTTTCTCTCGGCTTCGGAATCAAGCAACATGGACTCAAAGAAGGTTGGTACGACGGTGGAAGCATCTTCCTTGCTGTGTTCATTGTCATTTCTCTCTCTTCCATAAGCAATTTCAGACAGAATAGGCAGTTTGACAAATTGTCTCAGCTCAGCAACGATATACAAATCGATGTGGTGAGACTCGGAAGGCGGCAACAGGTTTCGATCTATGATATCGTCGTCGGCGACGTTGTTTGCTTGAAGATCGGCGATCAAGTCCCCGCCGACGGGCTATTCGTCGACGGACACTCGCTGCGAATCGACGAATCAAGCATGACTGGGGAGAGCGACCATGTGGAAGTTGGAAAGGTTCATAATCCGTTCTTGTTCTCCGGAACGAAAGTGGTTGACGGTTACGCGAAAATGATGGTTACTTCCGTTGGAATGAAGACTACATGGGGTCAAATGATGAGCTCGATTAGCCGCGACGTTAACGAGGAAACGCCGTTACAAGCTCGCCTTAACAAACTAACTTCATCAATCGGAAAGGTTGATGAAAATGGAGTGAAAGAGTTCAACGGGAGCAAGACTAAGTTCAGTGATATAATGAACTCTGTCGTCGGAATTGTGGCTGATGCAGTCACCATTGTGGTTGTTGCAATCCCTGAAGGGTTGCCGTTGGCGGTTACGTTGACTTTGGCTTATTCCATGAAGAAAATGATGGCGGATAAAGCTATGGTGAGGAAGCTCTCAGCGTGTGAGACTATGGGTTCTGCTACAACTATTTGCACAGATAAAACAGGAACACTCACACTCAACGAAATGAGAGTCACAAAGTTTTGGATGGGATTAGAACCTGTGTTGGAGAATGCGTATTCATCGGTTGCGCCTTTTGTTCTTCAATTGATCCAGGAAGGAGTGGCTTTGAACACAACTGGTAGCTTGGATATGAAGATGGATGAATTGACGAAAGGATGCTCCATAATTCAGGTTGAGACCTTCAACTCGAAGAAGAAACGGAGCGGAGTTTTGTTGCGAAGGAAATCGGACAACACGGTGAATGTGCACTGGAAAGGCGCTGCTGAAATGGTACTGAAAATGTGTTCAAAATACTACGATGCTTCTGGAATTTTGAAAGATCTTGACAGCGAAATCATGATGAAATTCGAGAACATCATTCAAGGAATGGCAGCTAGTAGTCTTCGCTGTATCGCTTTTGCTCAAACGGAGGTTTCAGATTCAGAGATAGAGGTTGAAGACGGAGAGGGAAAAGCTATGGTGAAAGAAAATGGATTGACTCTACTAGGACTAGTCGGAATCAAGGATCCGTGCCGGCAGGGGGTGAAGAAGGCGGTGGAGTCTTGCCAGAACGCCGGAGTAAATGTGAAGATGATCACAGGGGACAATGTTTTCACTGCAAGAGCAATAGCAACAGAATGCGGCATACTGAGACAAAATCAAGACATGGCTGGCGCGGTGGTGGAAGGCGAGGAGTTTCGCAACTACACGCCGGAGGAAAGGTTAGAGAAAGTGGACAAAATATGCGTGATGGCGAGATCCTCGCCGTTCGACAAGCTCCTGATGGTAGAGTGCCTAAAACAGAAAGGTCACGTGGTTGCCGTGACAGGGGACGGCACGAACGACGCGCCGGCACTGAAGGAAGCTGACATTGGACTCTCCATGGGGATCCAAGGCACAGAGGTGGCGAAAGAGAGCTCTGATATTGTGATTTTAGACGACAATTTCGCCTCCGTCGTAACGGTTTTGAGGTGGGGAAGGTGTGTTTATAACAACATTCAGAAGTTCATACAGTTCCAATTGACCGTGAATGTTGCTGCACTTGCAATAAACTTCGTGGCGGCGGTGTCGGCCGGCGAAGTTCCTCTCACGGCAGTGCAACTTTTATGGGTGAATTTGATCATGGACACGTTGGGAGCATTGGCACTTGCAACGGAAAAGCCTACTTTGGAGTTAATGGAGAAACCGCCGGTTGGGAGAACAAAACCTCTCATAACAAACGTGATGTGGAGGAATCTTATGGCACAAGCTTTGTACCAAATTGCGGTTTTGTTGACTCTTCAGTTCAGAGTTTTCAATGAGTTCAATGCAAGGAAATTGGAGAAGAGGAATGTTTTTAAGGGGTTACATAGGAGCAAGTTGTTCTTGGGGATTATTGGTGTGACAGTGGTACTCCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTGATACTGAGAGGCTGAATTGGGGGCAATGGGGTCTTTGCATTCTTCTTGGTGCTGCTTCTTGGCCAATTGGTTGGGTTGTGAAGATGATTCCAGTTCCAGAAAAGCCATTTCTTGATTTCCTGAGTATCAAGAAATGA 2811 0.4621 MSLLTNMERIESLFNAPNTKKKWHSAFLVIYCSRALASHFTLNNKTKQRKINPSPSFTVIDLNPQQPFAIDQTTLTTIVKEKDHATLKKHGGIEGIAKSLETDIEHGIKGDEDMSRRRHIFGSNTYPKPRSKSFVHFVLEAFKDVTILILLCCAALSLGFGIKQHGLKEGWYDGGSIFLAVFIVISLSSISNFRQNRQFDKLSQLSNDIQIDVVRLGRRQQVSIYDIVVGDVVCLKIGDQVPADGLFVDGHSLRIDESSMTGESDHVEVGKVHNPFLFSGTKVVDGYAKMMVTSVGMKTTWGQMMSSISRDVNEETPLQARLNKLTSSIGKVDENGVKEFNGSKTKFSDIMNSVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADKAMVRKLSACETMGSATTICTDKTGTLTLNEMRVTKFWMGLEPVLENAYSSVAPFVLQLIQEGVALNTTGSLDMKMDELTKGCSIIQVETFNSKKKRSGVLLRRKSDNTVNVHWKGAAEMVLKMCSKYYDASGILKDLDSEIMMKFENIIQGMAASSLRCIAFAQTEVSDSEIEVEDGEGKAMVKENGLTLLGLVGIKDPCRQGVKKAVESCQNAGVNVKMITGDNVFTARAIATECGILRQNQDMAGAVVEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVECLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTLELMEKPPVGRTKPLITNVMWRNLMAQALYQIAVLLTLQFRVFNEFNARKLEKRNVFKGLHRSKLFLGIIGVTVVLQVVMVEFLKKFADTERLNWGQWGLCILLGAASWPIGWVVKMIPVPEKPFLDFLSIKK* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3701 936 Gene3D - 590 707 IPR023214 -
Amo05g3701 936 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 81 923 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Amo05g3701 936 PANTHER CALCIUM-TRANSPORTING ATPASE 12 463 - -
Amo05g3701 936 PANTHER CATION TRANSPORTING ATPASE 12 463 - -
Amo05g3701 936 SFLD p-type atpase 393 743 IPR044492 -
Amo05g3701 936 PANTHER CALCIUM-TRANSPORTING ATPASE 845 910 - -
Amo05g3701 936 PANTHER CATION TRANSPORTING ATPASE 845 910 - -
Amo05g3701 936 SUPERFAMILY Calcium ATPase, transmembrane domain M 91 923 IPR023298 -
Amo05g3701 936 SMART Cation_ATPase_N_a_2 89 162 IPR004014 -
Amo05g3701 936 Pfam Cation transporting ATPase, C-terminus 844 921 IPR006068 -
Amo05g3701 936 Pfam Cation transporting ATPase, C-terminus 775 843 IPR006068 -
Amo05g3701 936 Gene3D - 286 425 - -
Amo05g3701 936 Gene3D - 844 922 - -
Amo05g3701 936 Gene3D - 94 285 - -
Amo05g3701 936 SUPERFAMILY Calcium ATPase, transduction domain A 210 307 IPR008250 -
Amo05g3701 936 SUPERFAMILY HAD-like 409 795 IPR036412 -
Amo05g3701 936 PRINTS H+-transporting ATPase (proton pump) signature 537 555 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo05g3701 936 PRINTS H+-transporting ATPase (proton pump) signature 690 706 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo05g3701 936 PRINTS H+-transporting ATPase (proton pump) signature 722 747 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo05g3701 936 Pfam haloacid dehalogenase-like hydrolase 408 704 - -
Amo05g3701 936 Gene3D - 708 843 - -
Amo05g3701 936 Pfam Cation transporter/ATPase, N-terminus 90 157 IPR004014 -
Amo05g3701 936 PRINTS P-type cation-transporting ATPase superfamily signature 690 709 - -
Amo05g3701 936 PRINTS P-type cation-transporting ATPase superfamily signature 411 425 - -
Amo05g3701 936 PRINTS P-type cation-transporting ATPase superfamily signature 584 595 - -
Amo05g3701 936 PRINTS P-type cation-transporting ATPase superfamily signature 714 726 - -
Amo05g3701 936 PRINTS P-type cation-transporting ATPase superfamily signature 256 270 - -
Amo05g3701 936 PRINTS P-type cation-transporting ATPase superfamily signature 606 616 - -
Amo05g3701 936 CDD P-type_ATPase_Ca_PMCA-like 115 823 - -
Amo05g3701 936 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 352 433 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo05g3701 936 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 663 771 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo05g3701 936 Pfam E1-E2 ATPase 210 389 - -
Amo05g3701 936 SFLD Haloacid Dehalogenase 393 743 - -
Amo05g3701 936 Gene3D - 426 589 IPR023299 GO:0000166
Amo05g3701 936 ProSitePatterns E1-E2 ATPases phosphorylation site. 413 419 IPR018303 -
Amo05g3701 936 PANTHER CALCIUM-TRANSPORTING ATPASE 463 844 - -
Amo05g3701 936 PANTHER CATION TRANSPORTING ATPASE 463 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3701 Amo-Chr5 101904090 101907122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3701 10 936 Primary Pumps ATPases AT3G22910 63.116 0.0 1184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3701 K01537 - gmx:100793918 1503.42