Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3667 ATGAAGATGTTTGCTTGGTTTGGCAAGAAGTTACAACACCTTTGTAGCGTTTTATGTGGCCAACTCACTCTTTCTACCAAATCATTCTTCTTCCTTGCGGCATGCCTTTGCCGCTTCCTCCTCCAACAAACCAACCCTCTTTTGGTTCAAATCATCTACTTTGTTTCCCTTTCCTCAATTGGTTTTGGTTTCCTCAAGATTTTTAAGCCTAGAACATCATCACCCTCCTTCACCCCTAGGAACCTTGACTTGTTCTTCACCTCCGTTTCATCCGCCACGGTTTCGAGCATGTCCACGGTTGAGATGGAGGTGTTTTCCAACCCCCAACTAATCACCATTACCATTTTGATGTTTGTAGGTGGTGAGGTTTTCACTTCCATGGTAGGGTTACACTTTATTAGGTCAAGGCTCAAAACCGAGTTAGATAAAATTGCTGCCTCTCATGCTAGGCTTAGTACAACACAACCCATTATTGTTGATGACCAAATTGAACTTGGTGAGAACTTGAGGTACTTGTCCATGAAGCATTTGGGTTTTGTAATTCTAGGTTACCTTGTAGTTGTCCATGTCATAGGGGTTTTGGGTGTGTCCCTTTATATTGAAGTTATTTCTAGTGCTAAAATGGTACTGAAGAATAAGGGTCTAAATAGGTTCACATTCTCTGTTTTCACCGTGATTTCAACTTTTGCAAGTTGTGGTTTTGTTCCAACTAATGAAAACATGGTTGTTTTTAGAAAGAATTCGGGTATGCTTCTAATGCTTGTTCCTCAAGTGCTTCTTGGGAACACATTGTACCCTTGTTGCTTGAGATTTTGTGTGTGGTTATTGGGAAAGTTTAACTATAAGAAGAAAGAGACAAGGTACCTTTTGAAGAAGACAGAGGAGGTTGGTTACAAACACTTGCTCTCAAGGGAGTATTCTATTTTCTTAGTTGCCACTGTTTTTGGGTTTATTGTGGTTCAAATTGTGGTGTTTTGTTCAATGGATTGGAATTCACAAGGTTTGGTGGGAATGAATGTTTATGAGAAGTTTGTTGGTGTGTTGTTCCAAAGTGTGAATTCAAGACACTCAGGAGAAACAATTGTGGATTTGTCAATACTATCTTCTGCTATCTTGGTCTTATTTGTGGTCATGATGTACCTTCCTCCATACACCTCTTTTCTTCCATTGAAAGATCATGAGAAGGATTCAGAAATAAGAAAGAGAAAAGGAAAATTAATGGAAAATTTGATATTCTCTCAGCTCTCCTATTTAGTCATTTTCGTCATACTAGTGTGCATAACAGAGAGGAAGAACCTGAAGGAGGATCCTCTCAATTTTAATGTTTTGAACATTGTTATTGAAGTTATAAGTGCATATGGGAACGTAGGGTTTAGTACAGGGTATAGTTGTAAAAGACAATTGCATCCAGAAGCAAACTGTGAAGACAAATGGTTTGGATTTGTGGGAAAATGGAGTGATGAGGGAAAGATTATTCTTATTCTTGTCATGTTTTTTGGAAGGCTCAAGAAATTCAACATGAATGTTAAAAAAAAGAAAAATAAAAAGTATTCGACCCGGCGGACCAGCTCGCCCCGCCCCGCCAAAACTCGCCAATTTGGCGCTAATTACTCACTTAACATATATGTACAGGCAGTCCCTATGAAGCACGGTGTGGTGCCGCCGTATCCGTATCGGACACGAATCCGACACCGACACTTGACGGATACTTTAAACGAGTTTATTGGTGATGTGTCTTTTTGCAGTGCAGAATTTTGGTGA 1761 0.3969 MKMFAWFGKKLQHLCSVLCGQLTLSTKSFFFLAACLCRFLLQQTNPLLVQIIYFVSLSSIGFGFLKIFKPRTSSPSFTPRNLDLFFTSVSSATVSSMSTVEMEVFSNPQLITITILMFVGGEVFTSMVGLHFIRSRLKTELDKIAASHARLSTTQPIIVDDQIELGENLRYLSMKHLGFVILGYLVVVHVIGVLGVSLYIEVISSAKMVLKNKGLNRFTFSVFTVISTFASCGFVPTNENMVVFRKNSGMLLMLVPQVLLGNTLYPCCLRFCVWLLGKFNYKKKETRYLLKKTEEVGYKHLLSREYSIFLVATVFGFIVVQIVVFCSMDWNSQGLVGMNVYEKFVGVLFQSVNSRHSGETIVDLSILSSAILVLFVVMMYLPPYTSFLPLKDHEKDSEIRKRKGKLMENLIFSQLSYLVIFVILVCITERKNLKEDPLNFNVLNIVIEVISAYGNVGFSTGYSCKRQLHPEANCEDKWFGFVGKWSDEGKIILILVMFFGRLKKFNMNVKKKKNKKYSTRRTSSPRPAKTRQFGANYSLNIYVQAVPMKHGVVPPYPYRTRIRHRHLTDTLNEFIGDVSFCSAEFW* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3667 586 PANTHER SODIUM TRANSPORTER HKT1 27 512 - -
Amo05g3667 586 MobiDBLite consensus disorder prediction 512 531 - -
Amo05g3667 586 Pfam Cation transport protein 403 505 IPR003445 GO:0006812|GO:0008324|GO:0055085
Amo05g3667 586 Pfam Cation transport protein 168 381 IPR003445 GO:0006812|GO:0008324|GO:0055085
Amo05g3667 586 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 27 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3667 Amo-Chr5 101406595 101415294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3667 66 505 Inorganic Solute Cotransporters AT4G10310 50.547 1.33e-148 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3667 K24976 - twl:119997267 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g3667 05 101406595 101415294 Amo15g1345 15 104034709 104040232 hybridization