Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3648 ATGACGGCGCGCTGCTATCCTCGACAGGCGATGACACTTTCTCTCCTTCCTAACGGCGACAACAGTGCTCAATCACGGTGTACTCCTCCACGTACGGTGACGGCGCGGTCCTCAATCGCGAGAAACCCCTCTCCCTTCTCTTCTCCTTGTTCTTCCTCTGTTCCTCCGTTTCCAGGTCTTCATCCTCGGGACATTCGAAGTGTGGATCCATCTTTGTTTTCGACGAATTTGGTACCCTCTTTGCTGGTTCATGAGCATATGATACTTCTAAATCTGGGCTCCCTTCAAGCAATAGCAATGAAAGATTGTTGGACTAAAGCCAAACTTCTGCCTCTGTTGATATTTACATGTAAAGGAGGGCAAGCTTTTCTGGAGTCATTGTTGCCCAGGTTGAACCCCAAGAACTGTAACGGAGGGCCATCAATGCCATTTGAACTCGAGGTTTGTCTAAAATTTACTACTTTCTTTTAA 471 0.4735 MTARCYPRQAMTLSLLPNGDNSAQSRCTPPRTVTARSSIARNPSPFSSPCSSSVPPFPGLHPRDIRSVDPSLFSTNLVPSLLVHEHMILLNLGSLQAIAMKDCWTKAKLLPLLIFTCKGGQAFLESLLPRLNPKNCNGGPSMPFELEVCLKFTTFF* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3648 156 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 59 149 IPR039204 -
Amo05g3648 156 Gene3D - 56 105 - -
Amo05g3648 156 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 59 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3648 Amo-Chr5 101051951 101055640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3648 59 149 MRS2 Gene Family AT5G22830 65.591 7.18e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3648 K16075 - ahf:112777500 172.94