Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3629 ATGTTGGAAGGTGGTGCTAAATTCCCTGGATTAATAGATCTCAACAAGCATACAACTGACAACTATTATGATTTCTCTCAAGGCTTTTACCATAAGCTTGGGGAGGGTACTAATATGTCGATTGACAGCATGCAAACAAGTAATGGTGGGGGATCTGTTGCGATGTCCATAGATAATAGTAGTGTTGGGTCTAATGATTCCCATACTCGCATATTGAACCACCAAGGGTTGCGGCGGCGTGCAAATGATAACTACTCTGTTCAAAACAGTGTAAATCGTCGAGGAAGAGTCACACATGCACTGAGTGATGATGCTTTGGCTCAAGCTCTAATGGATAGCAATTCTCCAACTGAGGGACTTGAAAATTTTGACGAGTGGACAATTGATTTAAGGAAGCTTAATATGGGCGAGGCCTTTGCTCAAGGAGCTTTTGGGAAACTCTACAGGGGAATGGCATATGTTCATGGACTTGGGTTGATCCACAGGGATTTGAAGTCTGATAATCTTTTGATTTTTGGGGATAAATCAATTAAAATTGCTGACTTTGGTGTTGCTCGGATTGAGGTGCAAACGGAAGGAATGACACCTGAGACTGGAACATACCGTTGGATGGCTCCGGAGATGATCCAGCATAGGCCTTACACACAAAGAGTGGATGTGTATAGCTTTGGGATTGTTCTTTGGGAGCTTATCACTGGAATGCTTCCATTTCAGAACATGACAGCAGTACAGGCAGCATTTGCAGTTGTAAACAAAAATGTTCGCCCGATTATACCCAATGATTGCTTACCTGTTCTCCGTGAAATCATGACCAGATGCTGGGATCCCAACCCTGATGTCCGGCCACCATTTGCAGAAATTGTAGGAATGCTTGAGAATGCAGAGACCGAGATCATGACAACTGTTCGGAAGGCTCGATTCAGGTGTTGCATGACACAACCAATGACTGCTGACTGA 957 0.4389 MLEGGAKFPGLIDLNKHTTDNYYDFSQGFYHKLGEGTNMSIDSMQTSNGGGSVAMSIDNSSVGSNDSHTRILNHQGLRRRANDNYSVQNSVNRRGRVTHALSDDALAQALMDSNSPTEGLENFDEWTIDLRKLNMGEAFAQGAFGKLYRGMAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQRVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKNVRPIIPNDCLPVLREIMTRCWDPNPDVRPPFAEIVGMLENAETEIMTTVRKARFRCCMTQPMTAD* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3629 318 PANTHER SERINE-THREONINE PROTEIN KINASE 149 309 - -
Amo05g3629 318 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 150 - -
Amo05g3629 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Amo05g3629 318 PRINTS Tyrosine kinase catalytic domain signature 153 171 IPR001245 GO:0004672|GO:0006468
Amo05g3629 318 PRINTS Tyrosine kinase catalytic domain signature 262 284 IPR001245 GO:0004672|GO:0006468
Amo05g3629 318 PRINTS Tyrosine kinase catalytic domain signature 199 209 IPR001245 GO:0004672|GO:0006468
Amo05g3629 318 PRINTS Tyrosine kinase catalytic domain signature 218 240 IPR001245 GO:0004672|GO:0006468
Amo05g3629 318 Gene3D Transferase(Phosphotransferase) domain 1 130 315 - -
Amo05g3629 318 PANTHER SERINE-THREONINE PROTEIN KINASE 2 150 - -
Amo05g3629 318 SMART serkin_6 29 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g3629 318 SUPERFAMILY Protein kinase-like (PK-like) 134 291 IPR011009 -
Amo05g3629 318 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 149 309 - -
Amo05g3629 318 Pfam Protein tyrosine and serine/threonine kinase 145 290 IPR001245 GO:0004672|GO:0006468
Amo05g3629 318 ProSiteProfiles Protein kinase domain profile. 27 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3629 Amo-Chr5 100658021 100659464 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3629 149 318 MAP Kinase Kinase Kinase AT2G24360 84.118 2.13e-106 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo05g3629 PK_Tyr_Ser-Thr 6.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3629 - - adu:107490079 352.058