Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3625 TTCTTAAATGCCCAAAATATGGACGTAGAATTTGATTGGCTATCTAAATTGGGCAAAATCAAAATCTTTAACACTGTAGAAGAGGCATGGCAATTTTGGATTGATTATGGTGGGAGGATGGAATTTGGTGTCCGCAAGCAATATTCTAACAAAAATGCAAATGAAAAAATTCTAAGTCTTAGGTTCGTCTGTACCAAAGAAGGTGTTTGTAAATCAGACAAAAAAGATTCTTTGACTGTCATTCCTAGACTTGAAACAAGGAGTAATTGTTTGGTAAAATTAGGAATCAGATATATTAAAGGCATTGAAAAGTGTGAGAATCATAATTTTTTCACATGTCAACGAAAAATATCTCAGGTTCAAATTCGAGAAATTGAATTGGCAGATGACTCGAAAATCACACAACGGGCTTCATTTGAATTGATGAGTAGACAAGTTGGTAGAAGAGAAAATATTGGTTATACACGTTTAGACCAAAAAAAATTTTCCGTACCAAAAGAATGA 504 0.3313 FLNAQNMDVEFDWLSKLGKIKIFNTVEEAWQFWIDYGGRMEFGVRKQYSNKNANEKILSLRFVCTKEGVCKSDKKDSLTVIPRLETRSNCLVKLGIRYIKGIEKCENHNFFTCQRKISQVQIREIELADDSKITQRASFELMSRQVGRRENIGYTRLDQKKFSVPKE* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3625 167 Pfam FAR1 DNA-binding domain 31 98 IPR004330 -
Amo05g3625 167 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 21 143 - -
Amo05g3625 167 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3625 Amo-Chr5 100622826 100623377 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g3625 FAR1 7.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3625 - - ahf:112709060 255.373