Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3609 ATGAGTTCATCACATTGCAAAATTGTAGTGTCACTTTCAATAATATTAGGCATACTTGTTTCATTCATGTTCAATGTTGGTGAGAGTCGACGTGGATTGTTCCCTCCTAAATCAATAACCATCATCATTAACAACAAATTGAGGAATAATAAGAATCTGAATACTCATTGCAGGGACAAGAATACAGATTTTGGGATGATAAATATTTTACCTGGTCAGTCTTGGAGTTTCAATTTTTCTCCTAACCCCATTTGGTTCACATCATTGTATTGGTGCTACTTTTCTTGGTTAGGAGAAGGAGAGCATCACTTTGAAATCTTTAATCATGCTCGTGATTATGAAGAATGCACAAATTGTATTTGGGACATTCGTGAAGGAGGTCCATGTAGGGTTTCCGGTTATGACGCCCCCTTATATTTTGTAAACTAA 429 0.3613 MSSSHCKIVVSLSIILGILVSFMFNVGESRRGLFPPKSITIIINNKLRNNKNLNTHCRDKNTDFGMINILPGQSWSFNFSPNPIWFTSLYWCYFSWLGEGEHHFEIFNHARDYEECTNCIWDIREGGPCRVSGYDAPLYFVN* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3609 142 PANTHER S-PROTEIN HOMOLOG 2 25 133 - -
Amo05g3609 142 PANTHER - 25 133 IPR010264 -
Amo05g3609 142 Pfam Plant self-incompatibility protein S1 41 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3609 Amo-Chr5 100162044 100162796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3609 34 132 Carbohydrate Esterase AT3G16970 35.922 4.46e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3609 - - ahf:112749289 123.635