Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3608 ATGACGATCTCATCATTATCACTCTCTAAGGTTGTAATAATGCTCATACTTGTTTCTTTCAATCTCAATGTTAGTATGATTGATGCTCAAGTTGCTCCTCAACCTATTGCGGTTGAGGTGACCATAAACAACAAACTGATCGATTCGGATCTTAAATTTCACTGCAAGGATCAACACAGTGCCCAGGATGATTTAGGGGACCAAACGGTTTCAACTGGTCGAAGTTTTAGTTTCAAATTCCTTGCAAGCCCTTTTTACGTGCCTTTGTACTCCTGTACCTTTTCTTGGCATGGGGCGCCAGATCGTCACTTTGATATTTATGAGGGTGAACGTGATGGTAAAAAATGCAACCAAGATTGTACTTGGGACATCTACGAGATCAATCCATGTAGGGTTTCGGGTTTTGATCAACAATGTTTTCCTTGGAAAGAGGGGTGA 438 0.411 MTISSLSLSKVVIMLILVSFNLNVSMIDAQVAPQPIAVEVTINNKLIDSDLKFHCKDQHSAQDDLGDQTVSTGRSFSFKFLASPFYVPLYSCTFSWHGAPDRHFDIYEGERDGKKCNQDCTWDIYEINPCRVSGFDQQCFPWKEG* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3608 145 PANTHER S-PROTEIN HOMOLOG 18-RELATED 19 142 - -
Amo05g3608 145 Pfam Plant self-incompatibility protein S1 40 142 IPR010264 -
Amo05g3608 145 PANTHER - 19 142 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3608 Amo-Chr5 100157686 100158123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3608 34 142 Carbohydrate Esterase AT3G16970 32.174 3.81e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3608 - K08747 aip:107641383 145.591