Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3603 ATGATGACTTCTATCTTCTCCAAAGTTATGGTCTCATTTTATATGGTACTAACCATACTCATTGCTTTCAAATGCAATGTTGGTGAGTGTGGATTTTTACTTCCAGATAAAGTGGTACTTGAGATTATCAACAAGCTAAATAGCAAGACAAATCTCAATGTTCATTGCAAAGACAAGCATCATGATCTTAATCTTCAAACAATTCAACCTAATCAAAGTTGGAGGTTCAAGTTTCTTCCAAACCCAGTTTGGGATTCATCATTATACTTTTGCAGCTTCACTTGGTCACAAACTTTGCACCGGTTTGATGTATATGTTGAATCTCGTGACCAAAAAGAATGCACGAAATGTACATGGGAGATAAGTGAATCTGGTCCATGTAGGGTTACGAGTCAAGATCGAAATTTAATTTTAAGCACTACAAGAAACAAGGGGTTTAGCCACGAAAAAAATGTGACAAAACTCCAAGATAACGATCAAGGAATTGGCAAGATTGATTGTGATCAGAGAGATTGGATTGCCAAGGAATTGGGATCCAATCAATTTTAA 549 0.3607 MMTSIFSKVMVSFYMVLTILIAFKCNVGECGFLLPDKVVLEIINKLNSKTNLNVHCKDKHHDLNLQTIQPNQSWRFKFLPNPVWDSSLYFCSFTWSQTLHRFDVYVESRDQKECTKCTWEISESGPCRVTSQDRNLILSTTRNKGFSHEKNVTKLQDNDQGIGKIDCDQRDWIAKELGSNQF* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3603 182 Pfam Plant self-incompatibility protein S1 40 134 IPR010264 -
Amo05g3603 182 PANTHER S-PROTEIN HOMOLOG 2 15 132 - -
Amo05g3603 182 PANTHER - 15 132 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3603 Amo-Chr5 100054526 100059984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3603 31 129 Carbohydrate Esterase AT3G16970 38.835 3.59e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3603 - - ahf:112749289 119.398