Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3597 GAAAATAAAAAAGTCTCCTCGCTTAGCTTCGTTTACTTTCCTTTCCCTTTCTTTTTCCAAAGCTTCACTTCCCACGGAAAAGCGCGAAAATCAATGGACCCACCACCGCCACCGGCAGCCACGTCATCCAACGGCGCCAACAAGCTCCGCCTCATGTGCAGTCACGGCGGTCATTTCCTCCCCCGTCCACGCACCAACACTCTCTTCTACGCCGGCGGCGAGACACGCATCGTCTCCTTCCATCGCCACAACCTCGCCACTATTTCCTCCTTCATTTCTCACATCTCCGCCACACTCTCCGTCGTGCCTCCGTTCAACATCAAGTACCACCTCCCACCTCACCTCCACCTCGACTCACTCATCTCTCTCTCTTCCGACGATGACCTTGCCGTACTCCTCGACGAGAACCGCCGCCTCAACTCCACTCCCTACCGCATCAGATTGTTCCTCTTCTTCTTCCACTCTTCTCCGCGTTCCGCCGCTGCAATTCGGCACCCGAAGACGGAGGCGTGGTTCTTCGACGCGCTTAAGAGTGCTAAGATTATGGAGCGTGATGCTCACGTGACCAGTCAGGAGTTTTGTTCCTCTGTGGCCGAGTCTATGGTTTTGGATACAACCTCATCTTTTGGCTCCACTTCTTCTTCAACTTCGTCGACGAATTTGCCTCCGTTGAGGGCTCAGGCTGATGAGAACAACAACAACGACGTCGTTTTGAAGGATAGCAAGGGGAAGTTGAATTCTTCGGATTCAACCTCGTGTGATAATACTGTTTCATCTAGTGTTATGTCCCACCAGCTAAATATATCTTACGAAGACCCTGCGGTTTATCATATTTCGGAGGCAAGAACCAATGCTGAATCCATTGAAGCTGAAAACAAATTCGCTTACATTTCCTCTGGGGTCATGGCGAATAACATGAATATGGATCTCGGGTATGCCTCATTTCCACAGTATAATCAAGTGGGGAGTCCACATTTGCAGTTTGTACAAGCTCCTCAGCAAATTCTACCAATCCACCCAAGTGGCCTGTTACCACTACCATCATGCCAACCCATGTACCAGCAACCGCAGCCATTGCAGAATATGGTTTACTATCCTAATCAATCGTGTGCTGTATACCTTGTGCCTATTGGAAACATCGCTCCCAATGGTTTTCCTATAGCTGCTTCTGGCAAAGCTTCATTGAATCTGAATCCGGATCCTCCCTTAATGAATGTTCATGTAGCTTACAAACCTATGGGGGAAGCCAGGTCTCCTTTTGGCCATGATTTTGCCCCACCAGATTACTTAACAGACAATGCAATGACTGCATCTTCTACTCATGTAACTCAGCAACAAGACATGGATATTTATTCATTTTATCATCAATCTCCAAACGTATCTATCAATTCTGGGGAATCTCCCGAGTTTGAAAATGAACTTGATGATGGCCTTGCTCGTGATCAGATATACAAATCCCAGCCCCCTCCTCCGAAATACCCAACCATGTCAAAAGCTACAACAAACTTGTTATCTGAGGCTCTTGCTAAATTGCATGTGGATAACCTGAAGCAGCAGACAGAACAGTAG 1569 0.4793 ENKKVSSLSFVYFPFPFFFQSFTSHGKARKSMDPPPPPAATSSNGANKLRLMCSHGGHFLPRPRTNTLFYAGGETRIVSFHRHNLATISSFISHISATLSVVPPFNIKYHLPPHLHLDSLISLSSDDDLAVLLDENRRLNSTPYRIRLFLFFFHSSPRSAAAIRHPKTEAWFFDALKSAKIMERDAHVTSQEFCSSVAESMVLDTTSSFGSTSSSTSSTNLPPLRAQADENNNNDVVLKDSKGKLNSSDSTSCDNTVSSSVMSHQLNISYEDPAVYHISEARTNAESIEAENKFAYISSGVMANNMNMDLGYASFPQYNQVGSPHLQFVQAPQQILPIHPSGLLPLPSCQPMYQQPQPLQNMVYYPNQSCAVYLVPIGNIAPNGFPIAASGKASLNLNPDPPLMNVHVAYKPMGEARSPFGHDFAPPDYLTDNAMTASSTHVTQQQDMDIYSFYHQSPNVSINSGESPEFENELDDGLARDQIYKSQPPPPKYPTMSKATTNLLSEALAKLHVDNLKQQTEQ* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3597 522 MobiDBLite consensus disorder prediction 209 256 - -
Amo05g3597 522 MobiDBLite consensus disorder prediction 464 497 - -
Amo05g3597 522 PANTHER OS05G0427100 PROTEIN-RELATED 32 518 - -
Amo05g3597 522 SMART PB1_new 63 153 IPR000270 GO:0005515
Amo05g3597 522 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 32 518 - -
Amo05g3597 522 SUPERFAMILY CAD & PB1 domains 66 158 - -
Amo05g3597 522 CDD PB1_UP2 52 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3597 Amo-Chr5 99979833 99982371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3597 49 150 MAP Kinase Kinase Kinase AT1G04700 39.423 1.09e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3597 - - aip:107644557 935.25