Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3575 ATGCATAATGTATTTTTTATTTCCAATATTATCAACCCAAAGTATGAGAATGTTTTAACCCGTGTAGTAACTTATGCTTCTAGACTTCCATTGGCTTTGGAAGTTATAGGTTCTAATTTGTTTGGAAAAGATTTAAAACATTACAAATATACTTCAAGCTCATTATCAGAGTTATATGAAATATCATATTGGATGTTGGTTGAAAAATCTCTCATAAAGAATGATCAATTCAAAATAACATTACATGATCTAACAGAGGACATGGAAATGCCTGGAAAGCATAGTAAATTATGGTTCTACAAGGATATAGTTAAAGTTTTAGAAGATAATCAAGAAACTAGTGCCATTGAAATCATACATTTGGAATATCCTTCATTTAGAAAGGAAGGAAGTGAAGATCGATTGGAAAAAGAGAAAAATGATGATGTAGAAATAAAAAATCTCAAAACACTTATCATAAAAAATTGTCATTTTTCCAATGGTCCCAAATATCTTTCAAATAGTTTAAAAATATTTGAATGGAGGAGATATCCATCGAGATATTTTTTCTCTAATTTTGATCCAGAAAAGCTTTCCTTACTCAAGTTATCTGATTATCTCTACATATCACCCAAGTTGGATAGTTTATCCAAGGAGAATGAAATGTATAGAATACCAAGTGTCATTGGCATGATGCCACGCCTGTTTGAATGTGATAGAGAGATTAGAGGGATTCCACCAAACTTGAAAGAGTTCTCAGCATTAAATTGCAAATCATTAAGCCAGAGGGGCACAAGTGTGTTACTCAATCAGCAAGTGCACGAGGGTAAAAGCACCCACTTTGTGATGCCAGGTGAAAGCATTCCAAGGTGGTTTGAGTGGTGCAGCAGTGGACCTTCTATTTCTTTCTGGTTTCGTGGCACCGAATTCCCTTCCAAATCTCTTTGCATTGCAATTCTACTCAAACATGACATCCATTCCCCACCACTTCAAGTAAAACCCATTGTGACCATCAATGGCAACCAAGTTTCACATGGATTTGGAAGACCAATGGATCAAATGTCTATTTTTAATATGAACAAACATTTTGATTATAAAGAAATACATTTTGAAAGAGGATGGAATCATGCGAAGCTTTCATATAAAGTATATGGGAGATATTTAATTGCAAAAGAGATGGGAATGCACATATTGAAGCAAGAGAGTAGTAGTACAATGGAAGATATTCGATTCACTGATCCATACAAAATGACACAACACAATGATGAAAGTGAGTTTGGAGCGAGAGCTAAAGGAACAGACCTTGACCTAGGTTGTGGTGGCTCAGGAGCAGGTTCTTCAGCAGCAGGGCGTTTGCCCTTGGATGATGCAGGTTTTGAGGAGCTCAGTTTAGAAGGAGTTGCCTTTGGTGGTGGCATTGGTTTGGTGGAGGAGGGAACCCTGGAGGGATTCTTTGTGCAAGCCATAGGGTCGGTTCGTGGAGGAGAGACTTTTGCGGGAAGAGAAGCAGTAAAGGTAGTGGAGGAAACCGAGGAGTTGAGGAGAAGTTAA 1530 0.3719 MHNVFFISNIINPKYENVLTRVVTYASRLPLALEVIGSNLFGKDLKHYKYTSSSLSELYEISYWMLVEKSLIKNDQFKITLHDLTEDMEMPGKHSKLWFYKDIVKVLEDNQETSAIEIIHLEYPSFRKEGSEDRLEKEKNDDVEIKNLKTLIIKNCHFSNGPKYLSNSLKIFEWRRYPSRYFFSNFDPEKLSLLKLSDYLYISPKLDSLSKENEMYRIPSVIGMMPRLFECDREIRGIPPNLKEFSALNCKSLSQRGTSVLLNQQVHEGKSTHFVMPGESIPRWFEWCSSGPSISFWFRGTEFPSKSLCIAILLKHDIHSPPLQVKPIVTINGNQVSHGFGRPMDQMSIFNMNKHFDYKEIHFERGWNHAKLSYKVYGRYLIAKEMGMHILKQESSSTMEDIRFTDPYKMTQHNDESEFGARAKGTDLDLGCGGSGAGSSAAGRLPLDDAGFEELSLEGVAFGGGIGLVEEGTLEGFFVQAIGSVRGGETFAGREAVKVVEETEELRRS* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3575 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 47 IPR044974 GO:0006952
Amo05g3575 509 PANTHER NB-ARC DOMAIN PROTEIN 2 47 - -
Amo05g3575 509 PANTHER NB-ARC DOMAIN PROTEIN 58 203 - -
Amo05g3575 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 230 315 IPR044974 GO:0006952
Amo05g3575 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 58 203 IPR044974 GO:0006952
Amo05g3575 509 PANTHER NB-ARC DOMAIN PROTEIN 230 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3575 Amo-Chr5 99620607 99632623 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3575 86 196 WRKY Transcription Factor Family AT4G12020 30.172 7.40e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3575 - - aip:107644586 259.996