Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3574 ATGTCAACCATCAGTCAAAAGAAAACATCACTTACTCTTGCTCTTTATATCTTGATTGATGACAATTTTGAAGGTGTGTGTTTTCTTGAAAAAGTGAGAGAAATTTCACAAAAATATGGGTTGATATTAAGAAAGGAAGGAGTTAGTTTTGATACTTTGGGAGAAGATGTGCAAAGAGTTTTTCTTGATATTGCTTGTTATTTTAAAGGATATAATTCATGGAAAGTTACAGATATACTTCAAGCTCATTATGGGAGTTGTATGAAATATTATATTGGAATGTTGGTTGAAAAATCTCTCATAAAATAA 309 0.2945 MSTISQKKTSLTLALYILIDDNFEGVCFLEKVREISQKYGLILRKEGVSFDTLGEDVQRVFLDIACYFKGYNSWKVTDILQAHYGSCMKYYIGMLVEKSLIK* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3574 102 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 102 IPR044974 GO:0006952
Amo05g3574 102 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 48 102 - -
Amo05g3574 102 SUPERFAMILY "Winged helix" DNA-binding domain 48 102 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3574 Amo-Chr5 99619740 99620594 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3574 49 101 WRKY Transcription Factor Family AT5G45050 41.379 5.68e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3574 - - aip:107644584 88.9669