Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3572 ATGGATTCTACTGATCGAGTTCACATGGTAGGGATATATGGAATTGATGGCATAGGAAAAACAACACTTGTTGTTGCTCTTTATAACTTGATTACTGACAATTTTAAAGAAATGCCTGGAAAGCGTAGCAGATTATGGTTCTACAAGGATATAGGAAGTGAAGATCCATCAGAAAAAGAGAAAAATGATGATGTAGAAGTAAAATGGGATGGAACAGCTTTTAAACAAATGAAAAATCTCAAAATACTTATCATAAAAAATGAGTTTTGGAATGGAGGAGGTATCCTTCAAAGTGTTTTCCCTCTAATTTTGATCCAAAATAGCTTTCCATACTTAAGTTGCCTAATTATCCCTACATGTTACCCAAGTTGGATAGCTTATCCAAGTGATTTTTTGAAAGAGATACTTGATGTGTCTAATCTTCAAACTTTAGAAGAATTTTCTTTCAAAAGATATTGTAATTTAGTCTTAGTTCACAGTTCAGTTGAGTATCGCAAACTCAGAAATTTTTCACCTGTTATTAATTTGGCCTCACTGGAAACACTCGGTCTATTTGGATGTTCAAGTCTTGAGAAATTTCTAAAAATTCCAAAAAAGATGAAAAATCTAGAAGAGCTTAGTTTGATTGGAACTGACATAAAAGATTTGCCATGTTCATTTTGTAACCTTTATAGATTGCATCGTTCAGATTTGGAGAAGAATGAAATGTATGGAATACCAAGTGTCATTGGCATGATACCACGCCTGTCTTGGTGTAATATTACATTAGGAGGAAATAAGGGGAGGGTATCAAGAGAAAAAGAAAAGAAGAAAATTAAGAAATCAAAAAGTATATTAATCACACGGAAAATGCTCAGCACGGGAAATAAAAAAAATACATTATGTATGTATATAATATAA 900 0.3222 MDSTDRVHMVGIYGIDGIGKTTLVVALYNLITDNFKEMPGKRSRLWFYKDIGSEDPSEKEKNDDVEVKWDGTAFKQMKNLKILIIKNEFWNGGGILQSVFPLILIQNSFPYLSCLIIPTCYPSWIAYPSDFLKEILDVSNLQTLEEFSFKRYCNLVLVHSSVEYRKLRNFSPVINLASLETLGLFGCSSLEKFLKIPKKMKNLEELSLIGTDIKDLPCSFCNLYRLHRSDLEKNEMYGIPSVIGMIPRLSWCNITLGGNKGRVSREKEKKKIKKSKSILITRKMLSTGNKKNTLCMYII* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3572 299 SUPERFAMILY RNI-like 69 250 - -
Amo05g3572 299 PANTHER ARCHAEAL ATPASE 37 254 - -
Amo05g3572 299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 51 IPR027417 -
Amo05g3572 299 Gene3D - 1 92 IPR027417 -
Amo05g3572 299 Gene3D Ribonuclease Inhibitor 117 295 IPR032675 -
Amo05g3572 299 PRINTS Disease resistance protein signature 9 24 - -
Amo05g3572 299 PRINTS Disease resistance protein signature 76 90 - -
Amo05g3572 299 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 254 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3572 Amo-Chr5 99611491 99613509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3572 166 255 WRKY Transcription Factor Family AT4G12020 36.264 4.44e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3572 - - aip:107644586 239.58