Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3571 ATGAATGACTTGTGTAATGCACGAAAAATGCTCAACACGGTAATTTTACCTCTGGAAATAGATTCTACTGATCGAATTCACATGGTAGGGATACATGGAATTGATGGCATAGGAAAAACAACACTTGTTCTTGCTCTTTATAACTTGATTACTGACAATTTTGAAGGTGTGTGTTTTCTTGAAAATATGAGAGAAATTTTACAAAAAATATGGGAGAGAATCCAGATAATAGGTGTTAAGGAAGGAATTTCACAGATACAACATAGACTCAGTCAAATAAAAGTTCTTTTGGTTCTTGATGATGTTGATGAACATGAACAGTGGATAGCTATTGCGGAAAAACCTGATTGGTTTCATCCTGTAAGCAGAATCAATATAACAACACAGGACAAATACTTGCTGACACCTCATGACATTGAAAGGACATATGAGGTACAAGGTTTAAATAAGAAAGGGTCCTTATATTTGCTTTATTGGAAAGCTTTTAAAACAGATATTGTCAACCCAAGGTATGAGAATATTTTAACCTGTTTTAACTTGTTTGGAAAAGATTTAGAACTGCAGAAATCTGCAATGGATCTATATGAAAAAGTTAGTTTTGATGTTTTGGGAGAAGATGTGCAGAGTGTTTTTCTTGATATTTCTTGTTATATACTTCAAGCTCATTATGGGAGTTGTATGAAGTATCATATTGGAATTTTGGTTGAAAAATCTCTCATAAAGAATGATCAATTCAGAATAACATTACATGATCTAATGGAGGACATGGGCAAAAATATATATCAAAAAAAA 792 0.3232 MNDLCNARKMLNTVILPLEIDSTDRIHMVGIHGIDGIGKTTLVLALYNLITDNFEGVCFLENMREILQKIWERIQIIGVKEGISQIQHRLSQIKVLLVLDDVDEHEQWIAIAEKPDWFHPVSRINITTQDKYLLTPHDIERTYEVQGLNKKGSLYLLYWKAFKTDIVNPRYENILTCFNLFGKDLELQKSAMDLYEKVSFDVLGEDVQSVFLDISCYILQAHYGSCMKYHIGILVEKSLIKNDQFRITLHDLMEDMGKNIYQKK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3571 264 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 261 IPR044974 GO:0006952
Amo05g3571 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 214 IPR027417 -
Amo05g3571 264 Pfam NB-ARC domain 10 167 IPR002182 GO:0043531
Amo05g3571 264 PRINTS Disease resistance protein signature 28 43 - -
Amo05g3571 264 PRINTS Disease resistance protein signature 89 103 - -
Amo05g3571 264 PANTHER ARCHAEAL ATPASE 17 261 - -
Amo05g3571 264 SUPERFAMILY "Winged helix" DNA-binding domain 197 263 IPR036390 -
Amo05g3571 264 Gene3D - 2 140 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3571 Amo-Chr5 99531184 99532236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3571 26 264 WRKY Transcription Factor Family AT5G45050 30.556 3.05e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3571 - - aip:107644586 342.428