Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3570 ATGAGTACATCATCAATATCACCGTCCAAATCCAAAATGATGAGAGTATCATCATCACTTTTTATGATACTGGCAATACTTCTTTCTTTCAATTTCAAAGTTGGTATGAGTGATGATGATTCCATTCTCCCTCCTAAAGAAATAACAGTCACCATTAACAACAAACTGAACATGAAACTTGGTCTCCATTGCAAGGACAAGCATTCGGATTTTGGGTTCGTAGAACTTCAAGTTGGTGAGAGTTGGAGCTTCGAGTTTTATAACCCTTTTCGCATTTGGTTCTCGCCATTGTATTGGTGCATGTTTACATGGTATAATGGGCAAGAAGTAGTGCACTACTTTGATATTTATGTTGGTAAACGTGATTGGCCAAATAGATGCTCTTACCTTTGTGTTTGGGATATATTTGAAGCACATCCGTGTAGGGTTACCGGTGGAGAACCTGAGTGTTTTCCTTGGAAGAATAATTAA 471 0.38 MSTSSISPSKSKMMRVSSSLFMILAILLSFNFKVGMSDDDSILPPKEITVTINNKLNMKLGLHCKDKHSDFGFVELQVGESWSFEFYNPFRIWFSPLYWCMFTWYNGQEVVHYFDIYVGKRDWPNRCSYLCVWDIFEAHPCRVTGGEPECFPWKNN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3570 156 PANTHER - 28 153 IPR010264 -
Amo05g3570 156 Pfam Plant self-incompatibility protein S1 49 153 IPR010264 -
Amo05g3570 156 PANTHER S-PROTEIN HOMOLOG 18-RELATED 28 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3570 Amo-Chr5 99506807 99507277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3570 47 153 Carbohydrate Esterase AT3G16970 33.333 3.02e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3570 - - adu:107489935 335.109