Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3569 ATGACTCTCTCATCATCGTCACTCTCTAAGATTGTAGTAACAATTCCCATGATAATGCTCATACTTGTTTCTTTCAATCTCAAAGTTGCTGCTATCCCTTGGACCATTCGTGTGACCATGAACAACAAACTGAACAATATGCAGCTTGGTATTGAATGCAAGGATAAACACTGGGATTCAGGGTTCAAAGTAGTTCCAGTTGGTCAAAGTTGGAGTTTTTATTTCCATCCAAACCCTTTTTGGTTCACATCATTGTTCTTCTGTACCTTTAGTTGGTATGAGGGGGGAGGAGTACATCACTTTGATATTTATGATGCTAAACGTGATGTTAATGTATGCAAAGAATGTATTTGGGATATCTCCAAAACTGGTCCATGTAGGGTTTCGGGTTTTGCTGCTCCTATATGTTATCCCTGGAAAAGTAGTAACCAATGA 435 0.3885 MTLSSSSLSKIVVTIPMIMLILVSFNLKVAAIPWTIRVTMNNKLNNMQLGIECKDKHWDSGFKVVPVGQSWSFYFHPNPFWFTSLFFCTFSWYEGGGVHHFDIYDAKRDVNVCKECIWDISKTGPCRVSGFAAPICYPWKSSNQ* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3569 144 PANTHER S-PROTEIN HOMOLOG 18-RELATED 13 139 - -
Amo05g3569 144 Pfam Plant self-incompatibility protein S1 38 139 IPR010264 -
Amo05g3569 144 PANTHER - 13 139 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3569 Amo-Chr5 99504185 99505419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3569 33 143 Carbohydrate Esterase AT3G16970 36.752 7.47e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3569 - - adu:107489894 177.178