Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3568 ATGAGGAGTTATGACGGAGAATTTGAGATGCTATATATGAATTTTGATCGAATAGAAGCCAATTTTCTCTCTCTCAACAATTATTTCTCTTATCCAAATCCTTATTTTACTGAAATTGTCAACGTTGCTTTTGAAACTGGAAGACCCAAACCAAAGCGACAAAACCCTAGCCCGGCCGCTGTCTCCGGGTTCTCAGCGCTTCCGCTTCTTCCTCTTCCCCTGTCCGAAACCAGTTCGCCGTCGGATCACCGCTTGCCGTCGTCTCGCCGGTTGCCGTCGTGGCAAACCTACGTCGATGACCACCTTCTCTGCGAAATTGAAGGCAACCACCTCTCCTCCGCCGCAATCGTCGGCCAAGACGGCAGTGTTTGGGCTCAGAGCTCTAATTTCCCTCAGTTCAAGCCTGAGGAAATTACTGCTATCATGAACGACTTTGCTGAGCCTTGA 447 0.4899 MRSYDGEFEMLYMNFDRIEANFLSLNNYFSYPNPYFTEIVNVAFETGRPKPKRQNPSPAAVSGFSALPLLPLPLSETSSPSDHRLPSSRRLPSWQTYVDDHLLCEIEGNHLSSAAIVGQDGSVWAQSSNFPQFKPEEITAIMNDFAEP* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3568 148 Gene3D Dynein light chain 2a, cytoplasmic 93 148 - -
Amo05g3568 148 PANTHER PROFILIN 93 148 - -
Amo05g3568 148 SUPERFAMILY Profilin (actin-binding protein) 93 148 IPR036140 -
Amo05g3568 148 PRINTS Plant profilin signature 92 105 IPR005455 GO:0003779
Amo05g3568 148 PRINTS Plant profilin signature 143 148 IPR005455 GO:0003779
Amo05g3568 148 PRINTS Plant profilin signature 118 131 IPR005455 GO:0003779
Amo05g3568 148 Pfam Profilin 93 146 IPR005455 GO:0003779
Amo05g3568 148 PRINTS Profilin signature 131 148 IPR005455 GO:0003779
Amo05g3568 148 PRINTS Profilin signature 94 103 IPR005455 GO:0003779
Amo05g3568 148 PRINTS Profilin signature 112 121 IPR005455 GO:0003779
Amo05g3568 148 PANTHER PROFILIN 93 148 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3568 Amo-Chr5 99501184 99503032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3568 93 148 Cytoskeleton Gene Families AT2G19760 71.429 2.71e-28 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3568 K05759 - sly:543830 116.316