Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3562 ATGACGATCTCATCATTATCACTCTCTAAGGTTGTAATAACAGTTTCCATGATAATGCTCATACTTGTTTCTTCTTTTAATCTCAATGTTGTATCATCACTTTGTATGATATTGGGCCTACTTATTTGTTTCAAGTTCAATGTTTGTGGGAGTGAAGATGGAATTTTTCCACCTCTGAAAGTAACAGTCACAATTATTAACAATTTGAGCGGCGGCAAGCAGCTTACGGTTCATTGCAAGGACAAGAAGAATGATTTTGGATTCAAAGAACTTCAAGTTGGTCAGAATTGGAGTTTCATCTTTCCTCCTTGGTTCACATCATTGTACTTCTGCTCCTTTGCATGGTCAACAGGATTTCACTACTTTGATATTTATGTTCATAATCGTGACATATATAGATGCAAACATTGTATTTGGGAATTCCCATATGTTATCATTGGAAAATCAATATAA 453 0.3466 MTISSLSLSKVVITVSMIMLILVSSFNLNVVSSLCMILGLLICFKFNVCGSEDGIFPPLKVTVTIINNLSGGKQLTVHCKDKKNDFGFKELQVGQNWSFIFPPWFTSLYFCSFAWSTGFHYFDIYVHNRDIYRCKHCIWEFPYVIIGKSI* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3562 150 PANTHER S-PROTEIN HOMOLOG 2 34 140 - -
Amo05g3562 150 Pfam Plant self-incompatibility protein S1 62 140 IPR010264 -
Amo05g3562 150 PANTHER - 34 140 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3562 Amo-Chr5 99415190 99417352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3562 56 140 Carbohydrate Esterase AT3G16970 38.462 4.43e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3562 - - ahf:112749289 233.417