Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3560 ATGAGTTCATCACATTGCAAAATTGTAGTGTCACTTTCAATAATATTAGGTATACTTGTTTCCTTCATGTTCAATGTTGGTGAGAGTCGACGTGGATTGTTCCCTCCTAAATCAATAACCATCATCATTAACAACAAATTGAGCAATAATAAGAATCTGAATACTCATTGCAGGGACAAGAATACAGATTTTGGGATGATAAATATTTTACCTGGTCAGTCTTGGAGTTTCAATTTTTCTCCTAACCCCATTTGGTTCACATCATTGTATTGGTGCTACTTTTCTTGGTTAGGAGAAGGAGAGCATCACTTTGAAATCTTTAATCATGCTCGTGATTTTGAAAAATGCACAAATTGTATTTGGGACATTCATGAAGGAGGTCCATGTAGGGTTTCCGGTGCTGAAGCCCCCTTATTTCTTCAGTTTTTATTTCAGTTAATTTTTTATTTTGTTAATTATATAAAATTTTTGTAG 474 0.3376 MSSSHCKIVVSLSIILGILVSFMFNVGESRRGLFPPKSITIIINNKLSNNKNLNTHCRDKNTDFGMINILPGQSWSFNFSPNPIWFTSLYWCYFSWLGEGEHHFEIFNHARDFEKCTNCIWDIHEGGPCRVSGAEAPLFLQFLFQLIFYFVNYIKFL* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3560 157 PANTHER - 25 133 IPR010264 -
Amo05g3560 157 Pfam Plant self-incompatibility protein S1 41 134 IPR010264 -
Amo05g3560 157 PANTHER S-PROTEIN HOMOLOG 2 25 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3560 Amo-Chr5 99398306 99399961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3560 34 132 Carbohydrate Esterase AT3G16970 34.951 2.38e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3560 - - ahf:112749289 128.257