Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3557 ATGACGATCTCATCATTATCACTCTCTAAGGTTGTAATAATGCTCATACTTGCTTCTTTCAATCTCAATGTTAGTATGATTGATGGTCAAGTTGCTCCTCAACCTATTGCGGTTGATGTGACCATAAACAACAAACTGCTCGATTCGGATCTTAAATTTCACTGCAAGGATCAACACAGTGCCCAGGTTGATTTAGGGGACCAAACGGTTTCAACTGGTCGAAGTTGGAGTTTCAAATTCCTTGCAAGCCCTTTTTACGTGCCTTTGTACTCCTGTACCTTTTCTTGGCATGGGGCGTCAGATCGTCACTTTGATATTTATGAGGGTGAACGTGATGGTAAAGCATGCAACCAAGATTGTACTTGGGACATCTACGAGATCAATCCATGTAGGGTTTCGGGTACTGATCAACAATGTTTTCCTTGGAAGGAGGGGTGA 438 0.4247 MTISSLSLSKVVIMLILASFNLNVSMIDGQVAPQPIAVDVTINNKLLDSDLKFHCKDQHSAQVDLGDQTVSTGRSWSFKFLASPFYVPLYSCTFSWHGASDRHFDIYEGERDGKACNQDCTWDIYEINPCRVSGTDQQCFPWKEG* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3557 145 PANTHER - 21 142 IPR010264 -
Amo05g3557 145 Pfam Plant self-incompatibility protein S1 40 142 IPR010264 -
Amo05g3557 145 PANTHER S-PROTEIN HOMOLOG 18-RELATED 21 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3557 Amo-Chr5 99344722 99345159 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3557 51 142 Carbohydrate Esterase AT3G16970 33.333 6.30e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3557 - K16777 aip:107641383 145.206