Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3548 ATGGCCATCTTTCTCTATGTATCAATAATTGTATCATCATTTTGCTACATATATTATTTCTTCCATAGGAGATTATGTAAGACTCCTCTCCTAATAGATTGGCCTATCCTTGGCATGTTACCAAAAGTGTTGTGGAACTTGTATCGGATACATGATTTCGTAACCGATATTTTGAAACAACATGGGAGAACCGGTGAATTCATGGGACCTTGGTTCACCAACATGAACTATTTGGTCACTAGTGACCCCATGAATGTTCATCACATAATGAGCAAGAGTTTTGACAACTATGTCAAGGGCTCCGAATTCCGCGAGATTTTCCAAGTATTTGGACTTGGAATTTTCACGGCGGATTCGGAGACCTGGAGGTACCATAGATCTTTGCTTCTCTCGTTGTTCAAGAATAGAAGATTCGAGATGTTTCTAGAAAAGACAATCAAGAAGAAGGTGGAATGTAGCTTAATTCCCACATTGGAAGATATGAGACAACATGGGATTGAGGTTGATCTACAAGATGTCTTCAATAGGTTCACATTTGATAATATATGTTCTATTGTTTTAGGGTATGATCCTAATTGTCTTTCTATTGAGTTCCCTGAAGTTGCATGTGAGAAGGCTTTTAATGAAGCTGAAGAGTCGTTATTCTATAGGCATGCTGTTCCAAAGAGTGTTTGGAAGCTTCTAGAAAGGCTTCAAATAGGTCAAGAGAGAAAGATGAGTGAAGCTTGCAAGGTGTTTGACCAATTCATATACTCTTGCATAGCATCAAAGAGAGAAGAGATAAGCAAGTACAACAAAAGTAGTCAAATAGATGAAGCTCAAGTTGACTTGCTTAGTGCTTTGATGATGATGAGAGAACAAGAACAAGAAAAGGGTCAAAGTCAAACATTATTAGTCAACGATGACAAGTTTTTAAGAGACTCAGCTTTTAATCTTTTTGTGGCTGGAAGAGATACCATAACTTCAGCTCTTACTTGGTTCTTTTGGCTTGTAGCTACAAACCCATTAGTTGAAACCAAAATTCTTGATGAAATCAAAGAAAATTTTGGATCAAATAATGATGAAATGAAGCACAAAGTTTTAGGCATAGAAGAGGTGAAAAAGCTAGTTTATCTSCATGGSGCTCTTTGTGAATCTTTGAGGCTATTTCCTCCTATTCCTTTTGAGAGGAARCAACCAATCAAAAGTGAMATACTCCCAAGTGGACATCATGTGAATCCAAATACAAYGATCTTACTTTCTTTGTATGCAATGGGAAGATATGAAGAGATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAAAAAGGAGGAATAATTCATGTGCCTTCTTACAAGTTTATTAGTTTTAATGCGGGGCCAAGAACTTGCTTGGGAAAAGACTTGTCTTTTATGCAAATTAAGATGGTGGCAGCSTCCATTTTGTGCAATTATCATATTCATGTGGTGGAAGGTCATCAAGCTATCCCAAGTCATTCAATTGTGCTTCTAATGAAGGATGGTTTGAAGGTTAGGATAACCAAAAGAGAAGGCTTTTAA 1554 0.3713 MAIFLYVSIIVSSFCYIYYFFHRRLCKTPLLIDWPILGMLPKVLWNLYRIHDFVTDILKQHGRTGEFMGPWFTNMNYLVTSDPMNVHHIMSKSFDNYVKGSEFREIFQVFGLGIFTADSETWRYHRSLLLSLFKNRRFEMFLEKTIKKKVECSLIPTLEDMRQHGIEVDLQDVFNRFTFDNICSIVLGYDPNCLSIEFPEVACEKAFNEAEESLFYRHAVPKSVWKLLERLQIGQERKMSEACKVFDQFIYSCIASKREEISKYNKSSQIDEAQVDLLSALMMMREQEQEKGQSQTLLVNDDKFLRDSAFNLFVAGRDTITSALTWFFWLVATNPLVETKILDEIKENFGSNNDEMKHKVLGIEEVKKLVYLHGALCESLRLFPPIPFERKQPIKSXILPSGHHVNPNTXILLSLYAMGRYEEIWGKDCLEFKPERWISEKGGIIHVPSYKFISFNAGPRTCLGKDLSFMQIKMVAASILCNYHIHVVEGHQAIPSHSIVLLMKDGLKVRITKREGF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3548 517 Gene3D Cytochrome P450 16 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 Coils Coil 270 290 - -
Amo05g3548 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Amo05g3548 517 SUPERFAMILY Cytochrome P450 33 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3548 517 PANTHER CYTOCHROME P450 8 513 - -
Amo05g3548 517 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 513 - -
Amo05g3548 517 Pfam Cytochrome P450 35 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3548 Amo-Chr5 99119137 99120827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3548 7 517 Cytochrome P450 AT2G23180 46.967 2.68e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3548 - - aprc:113867564 713.761