Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3541 ATGGCCAAATTGTTTCTCATTATACCAATCCTCCTATTATTCTCATATCTTGTTCATCGCAGAAGAAGTTGTAGAACCCCTCTGTTGATAGATTGGCCAATCCTTGGCATGTTACCACAAGTCCTTAGCAACTTGTGCCATATCCATGATTTTGTAACTAATGTTTTGAGACAAAAAGGTGGCACCGGTGAATTCATGGGGCCATGGTTCACCAAAATGAACTATATGATCACTAGTGACCCCATGAATGTTCATCACATAATGAGCAAAAGCTTTGACAACTATGTCAAGGGCCCAGAGTTTCGCGAGATCTTCCAAGCTTTTGGAGACGGTATTGTGACTGCAGATTCAGAGACATGGAGATACATTAGGACCATGCAACATTCCTTGTTCCGGCAACCGAGTTTTGAGACGATGGTGGAGAAAACCTTTCAAGAGAAGGTTCAGAATAGCTTGCTTCCGATACTTGACCATGCATGGTTACATGGAAATGTTTTGGATCTTCAGGATGTGTTTAGTCGATTAATGTTCGACGAGACATGCATCATGGTTTTAGGATATGATCCTAAGAGTCTCTCAATTGAGTTTCCATTGGTGGAAATTGAGAAGGCTTTCGATGAAGTTGGGGAGTGCATATTCTATAGGCACATAGTGCCAAGAAGTGTTTGGAAGTTTCAAGAGTGGCTTCAAATTGGTGAGGAGAAGAAGATGACAAAAGCATGCAAAGTTTTTGACCAATTTCTGTATTCATGCATTGCAACTAAGCGCCAAGAGTTAAATGAATGCAACAAAAGTAGTGGTGATGACTTGCTTAGTGCTATCATGATGATGGGTGAAGAAAAGGGCAAAATGGTCCATGATGATAAGTTTCTAAGAGATGCCGTATTCAATCTTTTTGTAGCCGGGAGAGATCCCATAACTTCGGCTCTTACATGGTTTTTTTGGCTCGTTGCAACACATCCATTAGTGGAGGCCAAGATTCTTGAAGAAATCAAAAAAGTTTTTGGCGCTATCGACGGGGAGAAGCGCAAAATTTTAGTGAAGGAAGATGTAAGGAAGCTAGTTTATCTGCATGGTGCTATATGTGAAAGTTTGAGACTATATCCAGCTGTTCCTATTGAACGTAAGCAATCATTGAAATGTGACACACTTCCTAGTGGTCATCGTGTTAATCCAAATACAATTATTCTGTTTTTTACTTATGCAATGGGAAGGTTTGAAGAGATTTGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATTTCAGAGAAAGGAGGAACAATACGTGTTCCATCTTATAATGGTGGAAAATCATCCTACTACCCCAGCTCATTCCACCGTGCTTTTTATGAAGCATGGCTTAAAGTTTGTTTCTACCAATTTCATGTTGTCATTGTTGGATCTTTAGGTATTATGCTTACTAAATCGGAGCTGTTCCATGCGTTCATCACTACAAAGCAGAACACTGTAGCGTGGACAGGGGTTTTTGGAGGGCTTTGA 1506 0.4057 MAKLFLIIPILLLFSYLVHRRRSCRTPLLIDWPILGMLPQVLSNLCHIHDFVTNVLRQKGGTGEFMGPWFTKMNYMITSDPMNVHHIMSKSFDNYVKGPEFREIFQAFGDGIVTADSETWRYIRTMQHSLFRQPSFETMVEKTFQEKVQNSLLPILDHAWLHGNVLDLQDVFSRLMFDETCIMVLGYDPKSLSIEFPLVEIEKAFDEVGECIFYRHIVPRSVWKFQEWLQIGEEKKMTKACKVFDQFLYSCIATKRQELNECNKSSGDDLLSAIMMMGEEKGKMVHDDKFLRDAVFNLFVAGRDPITSALTWFFWLVATHPLVEAKILEEIKKVFGAIDGEKRKILVKEDVRKLVYLHGAICESLRLYPAVPIERKQSLKCDTLPSGHRVNPNTIILFFTYAMGRFEEIWGKDCLEFKPERWISEKGGTIRVPSYNGGKSSYYPSSFHRAFYEAWLKVCFYQFHVVIVGSLGIMLTKSELFHAFITTKQNTVAWTGVFGGL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3541 501 Pfam Cytochrome P450 31 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3541 501 Gene3D Cytochrome P450 18 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3541 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 436 - -
Amo05g3541 501 SUPERFAMILY Cytochrome P450 16 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3541 501 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3541 501 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3541 501 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g3541 501 PANTHER CYTOCHROME P450 10 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3541 Amo-Chr5 98953730 98956926 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3541 14 435 Cytochrome P450 AT1G47620 46.387 4.51e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3541 - - aip:107641366 630.172