Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3525 ATGCGTGCCCCCATTCCCCCTCTTATTAACTCCAGGTTTGTTGTAGATGAACAATTTGTCCCAAAGGTTGGGATGACTTTCATGACACTAGAAAAAGCTAGAAAGTTCTACAAAAGTTATTCCAAACTTGCCGGTTTTTCTACCAAAATAAGGAACACGACTCGAAAGGGAGACGAGATTAAGAATCAACTAATCGTATGCAGTAGAGAGGGGAAGTGGAAATCCAAGATATTTCCAACTCTGAAGACAAACCCCTTAGCCGGCATAAACTGTCCAGCCAGGATTTACGTACACATATTGAAGGATGTCAGTTTTTGGACAATTTTTAAAGTTGTTCTGAATCATTCACACCCCTACTATCCAGACCGAGCAGAGATGCTCAAACAACATAGGGAGCTAAGCATGTTTGTGCGTCGCACCATTGAAAACAACGAGGAAGCCGAAATCAGACCGAGCAAAACATACCAATCATTTGTATACGATAATTGCCTAGCAAGCAAAGAGCAAAGAGAGAGAGAATTTGATGCTGCGGATTTTTACACCGGAATACCGTGCACAACAAAATCGGTAATAGAGGCTCAATTTCAGCACGTGTATACTCATGAGAAGTTCAATAAAGTTCAAGCACAATTCAGAGGAAATGTGAACTGCATCACAAGATCAATGCATTCCACCATAGGTTTTACGACATACGAAGTTGTAGAGCAAGTTTCTAACTCCACATTCAACAAGTTTTTCTGCCTGCTGTTCGAGTCAAGGGGCAAACTTTGCCGCTATTCCTTGAACATCTTAAGCTTTGAGCGAGTAGATAAAAGTAAGAACATAAAGAGGACGCACACACACGTCAAGTGCAGCCAACACGAGCCTCTATTGGAGCCGAGAAGCAAGAGATTTGATGATTTAGTGTTTCGATCACACAATATTTGCAAATTTGCGTCAGAGTCTGAGGAGTTGACCGGAATTCTGCACCGGGTTGCAAACGCCACAAAGAAAAAGAAAAAGCCAGCTCCAAGCGAGTTGAACCTTTTAGACAATGGATCAACGATTCAGTCAAGCTCCAACCTTTACAATGCACAGGATATGAATTATCCCAAAGAGGATTATAGGAGTTTCAATTTTTAG 1122 0.4153 MRAPIPPLINSRFVVDEQFVPKVGMTFMTLEKARKFYKSYSKLAGFSTKIRNTTRKGDEIKNQLIVCSREGKWKSKIFPTLKTNPLAGINCPARIYVHILKDVSFWTIFKVVLNHSHPYYPDRAEMLKQHRELSMFVRRTIENNEEAEIRPSKTYQSFVYDNCLASKEQREREFDAADFYTGIPCTTKSVIEAQFQHVYTHEKFNKVQAQFRGNVNCITRSMHSTIGFTTYEVVEQVSNSTFNKFFCLLFESRGKLCRYSLNILSFERVDKSKNIKRTHTHVKCSQHEPLLEPRSKRFDDLVFRSHNICKFASESEELTGILHRVANATKKKKKPAPSELNLLDNGSTIQSSSNLYNAQDMNYPKEDYRSFNF* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3525 373 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 17 132 IPR031052 GO:0006355
Amo05g3525 373 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 146 335 IPR031052 GO:0006355
Amo05g3525 373 PANTHER OS03G0843700 PROTEIN 17 132 - -
Amo05g3525 373 PANTHER OS03G0843700 PROTEIN 146 335 - -
Amo05g3525 373 Pfam FAR1 DNA-binding domain 35 119 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3525 Amo-Chr5 98510652 98513717 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g3525 FAR1 1.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3525 - - adu:107484182 354.369