Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3510 ATGTCTCCTTGTTGTTCTTCTCTCTCTCACTTGATCTCTGCAAACCTCACAACAATGCATACCATTCCCATGATTTCACACTCCATAGCCATATCCAAGTTTCCTCACCCATTTTCTTCTTCCTCTTTACCACTCCGTCTCAGTTTCACCATTAATGGTGGAGGAGGAGGAGGACCCTTCTTATCATACCCATCACAAAAGTTACCTCCTTTCCCCATTTCAGCTCCAAAAATTCAATCTTTCAAGGTCCTTGCTGCTGCTTCTGTTCCTGAAGCTAAGAGTGATGAACCTATCAAACCAGCTGGTTTAATTCAAATCCTTCAGCTTGGAGCCATGTTCGGAACTTGGTACCTCTTGAACATTTACTTCAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGCTTCATTGATGATTAACTTAATCTGGAGTCTTAATCTTCATCCCAGACCAAACATAACTCGTTCACAGCTTGTAGCAATTCTTCCACTGGTTGTGGCTCACACCATGGGGAATCTTCTAACCAACATTAGTCTTGGAAAGGTTGCTGTATCTTTCACACACACAATTAAAGCTATGGAGCCATTTTTCACTGTTGTTCTTTCCTCCCTCTTCCTTGGTGAGACGCCGACTTTTGCGGTAGTTTCTTCTCTTGTACCGATAGTAGGAGGAGTAGCACTGGCATCAATGACTGAAGTATCCTTCAATTGGATTGGCTTTGCTACTGCTATGGCATCTAACCTTACTAACCAGTCGCGGAACGTTTTGAGCAAAAAACTCATGGTCAATGAAGAGGAAACTTTGGACAATATCAACCTCTACTCTTTGATAACCATCATTTCCTTTATCCTTTTGGTTCCATTTACTATATTCTTGGAGGGTGTCAAGTTTACTCCGTCGTACCTGCAATCTGCTGCATGCCAAGGATTGAATGTTAGAGAGCTATGTGTGAGATCGGTTTTGGCGGCGTTCTGCTTCCATGCATACCAGCAGGTATCTTATGGAATATTACAAATGGTGTCACCTGTGAGCCACTCAGTAGGGAACTGTGTGAAGCGCGTCGTTGTCATCGCCTCCTCGGTTATCTTCTTCCAAATTCCTCTCTCGCCACTCAACACGCTCGGAACTGGTGTTGCACTTGTTGGAGTTTTCTTGTATTCAAGGGTGAAGCAGATAAAGCCAAAGCCACAAACTAAGGCTGCATAA 1245 0.4305 MSPCCSSLSHLISANLTTMHTIPMISHSIAISKFPHPFSSSSLPLRLSFTINGGGGGGPFLSYPSQKLPPFPISAPKIQSFKVLAAASVPEAKSDEPIKPAGLIQILQLGAMFGTWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFASLMINLIWSLNLHPRPNITRSQLVAILPLVVAHTMGNLLTNISLGKVAVSFTHTIKAMEPFFTVVLSSLFLGETPTFAVVSSLVPIVGGVALASMTEVSFNWIGFATAMASNLTNQSRNVLSKKLMVNEEETLDNINLYSLITIISFILLVPFTIFLEGVKFTPSYLQSAACQGLNVRELCVRSVLAAFCFHAYQQVSYGILQMVSPVSHSVGNCVKRVVVIASSVIFFQIPLSPLNTLGTGVALVGVFLYSRVKQIKPKPQTKAA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3510 414 PANTHER SOLUTE CARRIER FAMILY 35 71 406 - -
Amo05g3510 414 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 107 409 IPR004696 GO:0016021|GO:0022857|GO:0055085
Amo05g3510 414 Pfam Triose-phosphate Transporter family 107 400 IPR004853 -
Amo05g3510 414 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 71 406 - -
Amo05g3510 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 150 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3510 Amo-Chr5 98396221 98399704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3510 70 411 Antiporters AT5G33320 63.450 7.87e-147 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3510 K15283 - gmx:100819280 568.926