Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3507 ATGGCAAAATCGCAAGAAGAACGTGTTTCAAGTGAGGATCCTCCTTTATGCACTCCACCTAGCCGAAATTCATTAATGGAGGTCGATATAGTGGAACCGCTAGATTGTGTAGCCTCTGACGTTTCAGAAAATTTATCATACGAACAAGAAAACTTAGCCAGTGATGTCGCAGGCCATGGTCACAAGTCGAACAAGGCCACGCAGTTGTCGGATGTTACAGATGTTGGAAGTGAAGAGATGGAGCTTGTTGATGAGTTACCAGATCATGGTTGCCTACAAGAAGACGAGATACCAAGAGTTGGAATACAGTTTGCTCAGTTACAGATGGCTCATGACTTTTATGTGACCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGATGACAACATTTGATAAGATCACAAAGGCTCCCATTAACCAAGCTATACACTGTAATCGTGATGGGATCTGCGAGTCTCGTGTTAAAGCACCAACGCAAAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTTTGCTCAAGGTTGACTTGACGCACTCTCACCCCTATTCACCAAAAAAGGCAGTGCACTACCATGAGTATAGGCAGCTGACCATGCATGCGAAGTTAAACTCAGTATAA 666 0.4324 MAKSQEERVSSEDPPLCTPPSRNSLMEVDIVEPLDCVASDVSENLSYEQENLASDVAGHGHKSNKATQLSDVTDVGSEEMELVDELPDHGCLQEDEIPRVGIQFAQLQMAHDFYVTYAKKAGFATKIRMTTFDKITKAPINQAIHCNRDGICESRVKAPTQKNTISAAGCKARIYVKFDKDVQDWVLLKVDLTHSHPYSPKKAVHYHEYRQLTMHAKLNSV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3507 221 MobiDBLite consensus disorder prediction 1 23 - -
Amo05g3507 221 Pfam FAR1 DNA-binding domain 112 198 IPR004330 -
Amo05g3507 221 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 41 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3507 Amo-Chr5 98360467 98363256 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g3507 FAR1 8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3507 - - ahf:112733025 402.519