Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g3486 ATGAATACGACGCCGTTTATGGACAAGCAGATTATGGATCTCACCCACTCTGGTTCTTCACAGAGCAAGGACCTCATCGACCTCATCAACAACAACAACCATAATCACAAACACAACAACACTGATGACGAAGATGAACGCGTTGAATCCCAACTAGAACATCATCGTCAAGAAACCCTAAATAATAATCTCAATGGGATTGGGGTCACCAAAGATGACATCATTCCTAGCTACGATTTCCAACCCATTCGCCCCCTCGCCGCTTCTTCCCCTAATTACGATTCTGCCCCCAATTTAGCTGCTTCTGCTGCTTTCTCAACTAGGTCATGGAACTCCGATTCCAATGCTAACACTTCCCCTCCGCGCCCTCTCATCAAGAGTTACAGTTCTCTGGATACTATTGAACCTACAAAGGTTGCTGCGGTAGGAAAGGACCAAAAGGCTCTTGATGCAATAATTTTGTCTGAAATTGATCAAACCATGAAGAAACATATGGAAAATCTGCTTCATGTTATGGAAGGTGTTAGTGCGCGGTTAACACAGCTAGAAAGCCGAACCCACCGACTTGAGAATTCTGTGGATGATTTCAAGGTATCTGTTGGAAACAATCATGGAAGCACTGATGGAAAACTAAGGCAATTGGAGAATATTCTGCGAGAGGTGCAATCAGGGGTGCAGACCGTCAAGGATAAGCAAGATATATTGGAAGCTCAGCTGCAGCTGGCAAAGCTGCAAGTGTCYAAGACGGATCAGCAGTCAGAAACACAYACTAGTGTAGTTACAAATCCCATTCAGCAAGGTGCATCTGCACCCCAGCAATCTCAGCCACAGTTTCCTCCTCKCGCTAATCTCCCACAATCAATTCCTGCAGTCCCTTCCCCAAATGCGCCTCCTCAACCTCCCCCTCAACAGGGATTGCCACCTCCAATTCAACTTGCAAATCAATTCCCACAGAACCAAATCCCAGCTGTTCCTCAGAGAGACTCATACTTTYCTCCACCACCACCTGTTCAACCTCAGGAGGCCCCAAATCAGCAGTACCAAGTGCCTCCAACTCAGCAGCCGCATCCTCAGCCYGGGGCACCCCCACATCAACAGTATCAACAGAGCCCTCATCCCCAGTTCTCACAGCCAGCACCTCATATACCTCAACAGCAGCCAGCACCTCATTTACCTCAACAGCCGCCAGCAATTACGCCCGTAAATCTGCCGCAAATTCAATCTTCACTTGGCCAGCATGTTGAGGAAACACCTTATGTTCCTTCMCAAAACTATCCACCCACTCTGCACCAGCCAACATCTCAGCCACCTAGTGGGCCTCCGCCTACCCAACAGTACTATGGCGCACCAACCCATGCYTATGAACCYCCATCAAGTAGACCTAATCCAGGRTATTCTTCTGGATATGGTACATTATCGGCTCCTGCTGAGCCGTACCGTTATGGTGGATCATCACAATATGGTGGCACACCTGCACTTAAGCCACAACAACTACCTACTGCTTCATCAGTGTCTCCAAGCAGTGGAAGTGGCTACCCACAGCTCCCGACTGCTCGTGTACTCCCTCAGGCATTACCAACTGCATCTGTAGCAAGTGGGGGTTCAGGTTCTACCGGAGGTGGGAATAGGGTTCCCATTGACGATGTAGTTGACAAAGTTTCTAGTATGGGATTCCCTAGGGACCACGTAAGGGCAACGGTTCGGAAGCTGACAGAGAATGGACAATCAGTTGACCTGAATGCAGTTCTGGACAAGCTTATGAATGATGGTGAACTGCAGCAAAGAGGTTGGTTCAATCGGTAG 1803 0.4831 MNTTPFMDKQIMDLTHSGSSQSKDLIDLINNNNHNHKHNNTDDEDERVESQLEHHRQETLNNNLNGIGVTKDDIIPSYDFQPIRPLAASSPNYDSAPNLAASAAFSTRSWNSDSNANTSPPRPLIKSYSSLDTIEPTKVAAVGKDQKALDAIILSEIDQTMKKHMENLLHVMEGVSARLTQLESRTHRLENSVDDFKVSVGNNHGSTDGKLRQLENILREVQSGVQTVKDKQDILEAQLQLAKLQVSKTDQQSETHTSVVTNPIQQGASAPQQSQPQFPPXANLPQSIPAVPSPNAPPQPPPQQGLPPPIQLANQFPQNQIPAVPQRDSYFXPPPPVQPQEAPNQQYQVPPTQQPHPQPGAPPHQQYQQSPHPQFSQPAPHIPQQQPAPHLPQQPPAITPVNLPQIQSSLGQHVEETPYVPSQNYPPTLHQPTSQPPSGPPPTQQYYGAPTHAYEPPSSRPNPGYSSGYGTLSAPAEPYRYGGSSQYGGTPALKPQQLPTASSVSPSSGSGYPQLPTARVLPQALPTASVASGGSGSTGGGNRVPIDDVVDKVSSMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNDGELQQRGWFNR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g3486 600 MobiDBLite consensus disorder prediction 489 514 - -
Amo05g3486 600 MobiDBLite consensus disorder prediction 253 281 - -
Amo05g3486 600 Pfam UBA-like domain (DUF1421) 546 590 IPR010820 -
Amo05g3486 600 MobiDBLite consensus disorder prediction 253 547 - -
Amo05g3486 600 MobiDBLite consensus disorder prediction 309 325 - -
Amo05g3486 600 MobiDBLite consensus disorder prediction 376 399 - -
Amo05g3486 600 MobiDBLite consensus disorder prediction 350 366 - -
Amo05g3486 600 MobiDBLite consensus disorder prediction 36 50 - -
Amo05g3486 600 MobiDBLite consensus disorder prediction 282 308 - -
Amo05g3486 600 MobiDBLite consensus disorder prediction 430 444 - -
Amo05g3486 600 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 600 - -
Amo05g3486 600 MobiDBLite consensus disorder prediction 29 50 - -
Amo05g3486 600 MobiDBLite consensus disorder prediction 400 429 - -
Amo05g3486 600 Coils Coil 211 245 - -
Amo05g3486 600 Coils Coil 165 185 - -
Amo05g3486 600 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g3486 Amo-Chr5 97993864 97997411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g3486 10 331 Trihelix Transcription Factor Family AT5G14540 45.482 7.34e-67 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g3486 - - adu:107490056 1012.29